Lolium perenne (perennial ryegrass): 127318656
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Entry
127318656 CDS
T08650
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lper03009
]
127318656
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127318656
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
Pre-60S particles
Helicases
127318656
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DBP10CT
P-loop_SecA
APC_u5
Motif
Other DBs
NCBI-GeneID:
127318656
NCBI-ProteinID:
XP_051205094
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Position
7:142954181..142963283
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AA seq
857 aa
AA seq
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MARLTPSTSGGGKSKPSADAAAASTRDHRPRHRPQMKSKAAGKKKAAQAAHNKKPKSGGF
ESLGLCEDVYRGVRHKGYRVPTPIQRKAMPLIIAGLDVAAMARTGSGKTAAFLVPMLQRL
RRRDPGAGIRALVLSPTRDLATQTLKFTHQLGKFTDLKTGLIVGGGSMDSQFEVLADNPD
IIIATPGRFVHILDMVDDLSLRSVEYVVFDEADSLFSLGFAEQLHKILHKLSDTRQTLLF
SATMPQALAEFAKAGLRDPQVIRLDLDKKISPDLKLVFFTLRQEEKLAALLYLVRERISS
QEQTMIFVSTKYHVEFLSILFREEGLATSLSYGAMDQEARTEHIAKFRARKTMVLIVTDV
AARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRTGTAYTFVTSEDMPFMLDLHLFL
SKPLRPAPTEEELLKDMDGINLKIDQSLANGETVYGRFPQTIIDLCSDGVKEVMNSCTEL
IALEKPCANAFRLYLKTRAMPSKESIRRAKDFPREGLHPIFRDVLRSDEILALAFSERLK
SFRPKQTILEAEGEGAKSRSFKANQWLDVMKKKREVHEGIINLVHEQKSGNLATKEEEAE
NISNWERKEVSGTKRKSQSFRDEDHYISSVPQNQHSEAGLSVTGNEGFVQDRLDAAVLDL
VDDETSGMQAQKTRYHWMKNKFVKLNNGDRVTASGKIKTETSAKLKASKDIYKKWQQRSH
RAISSGGKDGNFEEGGTSTPGGHQRGDRRHPAAGRGRWSIPNANVPSEIRNPQQMQKGRQ
QKAMQNMRMKEKSAKDGKFPNKFQKNRRPGGSARDGKFENSKFQKNRRPEGKGSGKGNGK
GFGKAKGKGKPKGKGAR
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcctcacgccctccacctccggcggcggcaagtccaagccctccgcggacgcc
gccgccgcctccacgcgtgaccacaggccgcggcatcggcctcagatgaagtcgaaggcg
gcggggaagaagaaggcggcgcaggcggcgcacaacaagaagcccaagtcgggcgggttc
gagtcgctggggctctgcgaggacgtctaccgcggggtgcgccacaagggctaccgcgtg
cccacgcccatccagcgcaaggccatgccgctcatcatcgccggcctcgacgtcgccgcc
atggcccgcacagggtccgggaagaccgccgccttcctggtccccatgctccagcgcctc
cgccgacgcgaccccggcgccggcatccgcgccctcgtcctctcccccacccgcgacctc
gccacgcagacgctcaagttcacccaccagctcggaaaattcacagatcttaaaactggc
ctgattgttggtggaggcagtatggacagtcagttcgaggtattggctgacaatcccgat
attataattgcgacacccggtaggtttgtgcacattctggatatggttgacgacttgtca
ctgcgatcggtagaatacgttgtctttgatgaagcggattccctcttcagcttggggttc
gctgagcaactgcacaaaattctacacaagctgagtgatacacggcaaacattgctcttc
agtgctactatgccgcaagccctagcagaattcgcaaaagctggcctacgtgatcctcaa
gttatcagacttgatttggacaaaaagataagccctgatctgaagctcgtctttttcacg
ctgcgccaggaagagaagctagctgctttgctgtatttggtcagggagcggatcagctcc
caggaacagacaatgatatttgtttcaacgaagtaccatgttgaattcctgagtattctt
ttccgagaggagggcctagcaacttccctttcctacggtgctatggatcaggaagcccgc
actgagcatattgcaaaattcagggcaaggaagaccatggtactcattgtgacagatgtt
gctgcaaggggcctggatattccgttgcttgacaatgtagtgaactgggatttccctgca
aaacctaagttatttgttcatagagttggccgtgtagctcggcaaggtagaactggtaca
gcatatacatttgtcacctcagaggacatgccctttatgttggacctacatctctttctt
tcaaagcctcttagacctgctccaacagaagaggaactgctgaaagacatggatggaatc
aatttgaaaatcgaccagtctcttgctaatggggaaacagtatatggccgttttcctcag
acaatcattgatctttgctctgatggagtaaaagaagtcatgaatagctgcacagaattg
attgcattggaaaagccgtgtgcaaatgctttccgtttgtatctgaagactcgtgccatg
ccttcaaaggaatctatcagaagggcgaaagattttccccgtgaagggcttcatccaatt
ttcagagatgttcttagatcagatgaaattttagctcttgctttctcagagcgcctcaag
tcatttaggccaaagcaaactattctagaggctgaaggtgaaggtgctaaatcaagaagt
tttaaagctaatcagtggctagatgtgatgaagaagaaaagagaagtccatgaggggatc
ataaatttggtgcatgaacagaaatctggtaatctggcaacaaaggaagaagaggcggaa
aacatttcaaactgggagagaaaagaagtttctggtacgaagcggaagtcgcagagcttt
agagatgaggatcactacataagttcagtacctcaaaaccaacattcggaagctggatta
tcagtgacgggaaatgaaggatttgttcaagatagattggacgctgctgtcctagattta
gttgatgatgaaacttctggaatgcaagcccagaaaactcgatatcactggatgaagaac
aaatttgtcaagctgaataatggggatcgtgtcactgcttcagggaagattaaaacggaa
accagtgcaaagttaaaggcaagcaaagatatctataagaaatggcagcagaggtcacat
agagcaatcagttctggtggaaaagatggcaactttgaagaagggggcacatctacacca
ggtggccatcaaagaggtgacagaagacaccctgcagctggccgtgggcgttggtctata
ccaaatgctaatgtgccatctgagataagaaatccccaacagatgcagaagggcaggcag
caaaaagcaatgcaaaacatgcgcatgaaggagaaatctgcaaaggacggtaaatttccc
aacaagttccagaaaaacagaaggcctggcgggtctgcaagagatggtaaattcgaaaac
agtaaattccagaaaaaccgaagaccagaggggaaagggagtggaaaagggaatggcaaa
gggtttggtaaagctaaaggaaaaggcaaacccaaagggaagggtgccaggtga
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