Lolium perenne (perennial ryegrass): 127321025
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Entry
127321025 CDS
T08650
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127321025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127321025
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127321025
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
127321025
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
Motif
Other DBs
NCBI-GeneID:
127321025
NCBI-ProteinID:
XP_051206036
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All DBs
Position
6:44779705..44783499
Genome browser
AA seq
320 aa
AA seq
DB search
MSARDLHLRLSQAQRVRLEAALHELHTLNPAAAAAAVNVADNIPVNHEDSILKGHGTSDR
DGEVVATLCGVVERVQSLVSVRTLRARYKPEIGDIIVGRVSEIAPKRWRLEINFSQGAVL
MLSSVNLPDGVQRRRTAVDELNMRSIFAENDVVCAEVRGYLPDGSLELHASSQKYGKLQR
GQLLTVPAYLVKQWNQHFHHLKQYNVDLILGCNGFIWVGEHVVVAENTDVKEDQQKLAME
ADNFTPIETRTHICRLANAVRVLSALGFTLTVELIIQTAEASLPSTVEINEMLGAEFYVQ
TAEREAKRRASSLRKMNGAS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagagacctccacctccggctgagccaggcccagagggtccgcctcgaggcc
gcgctccacgagctccacaccctcaaccccgccgccgccgccgccgccgtcaacgtcgcg
gacaacatccccgtcaaccacgaggacagcatcctcaaagggcatggtacgtcggatcgg
gacggggaggttgtggccacgctgtgcggcgtggtggagcgggtccagagtctcgtcagc
gtgcggacgctccgggcaaggtataagccagagattggggatatcattgttggccgtgtc
agtgagattgctcctaagcgctggaggttggagataaactttagccaaggtgctgttttg
atgctttcttctgtgaatttgccagatggagtccagagaaggagaaccgctgttgatgag
cttaatatgcggagtatatttgcagaaaatgatgttgtctgtgctgaagttcgtggatac
ctacctgatggttctcttgagctacatgcaagtagtcaaaaatatggaaagcttcagagg
ggtcaattgctcacggtacctgcatatttggtaaaacagtggaatcagcatttccatcat
cttaagcaatataacgtggacttgattcttggctgcaatggtttcatctgggttggtgag
catgtcgtggtggctgaaaatacagatgtgaaggaagatcaacagaagttggccatggaa
gcagataactttaccccaatagaaactagaacacatatttgccggcttgccaatgctgtt
cgagtgctttcagcccttggattcactctgaccgttgaactgataattcaaaccgctgaa
gcaagtctaccatcaactgtcgagataaacgaaatgctcggagctgaattttatgtccag
actgcagagagagaggctaagcgtcgagctagttccttgaggaagatgaatggggcatcg
taa
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