Lolium perenne (perennial ryegrass): 127321945
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Entry
127321945 CDS
T08650
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lper03009
]
127321945
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
90S particles
Other 90S particles
127321945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
127321945
NCBI-ProteinID:
XP_051206858
LinkDB
All DBs
Position
2:complement(147190158..147207253)
Genome browser
AA seq
1886 aa
AA seq
DB search
MAPHGDRKKGKKGPDRPGKPELRANRKEFKNHHKEDAIEEQQQPAALFNAADDGDFPRGG
RSLLSRDEMAEARTEAEAEFDKEERTGNKKKKRNANVSLGMDTGDDDLGTLFGSATTGKL
PRFANRITLKNISPNMKLWGVVIEVNQKDIIVSLPGGMRGFVRTEEVSDIALHGNTRDND
GTLCAEVVHVGQLVPCMVLRVDDDKKEGKVNKRVWLSLRLSRMYKGLSLDAIQDGMVLTA
QVKSVEDHGYILYFGVSTFTGFMPKADKETVKTESGKLIQCVVKAIDKPRSIIHLSSDED
LISKSIIKDLKGLSIDHLIPGMMMSARVHSVLENGIMLSFLTYFTGTADIFNLSNSFPSG
NWKDDYSKNKKVNARILFVDPSTRAVGLTLNQHLLRLNVPPINVKVGEIYDKSRVLRMDK
RAGLFLEIPSPTPSPGFVSIHDVSDKDVKNVEKKFREGSLTRVRVLGVRHLEGVALGTLK
DSAFEGSVFTHADVKPGMVVRAKIVTVEPFGAIVQFSSGVKALCPLPHMSELDNVVKPPK
KFKVGAELLFRVLGCKSKRITVTYKKSLVKSKLEVLASYADAKIGLVTHGWITKIEKHGC
FVRFYNGVQGFVSRSEIGLEPGTEAESVYHVGQVVKCRIVSVIPTSRKLNVSFATSSNRA
IQADTAKVGTIVSGVVERLTPGAVVVSVNGFSKGSILNEQLADYHGQVAQLKNLLKPGHE
FSQLLVLDAEGQNLILSAKPSLINTANEIPSEISQMQAGAVVHGYICNIIEAGCFVRFLG
PLTGFSPKDKAVDRPIEKLSDAFCVGQSVRSHVLNVNADSARVKLSLQQSMCSSPDCSFI
QGYFLLDKKIAALKYSGPSTSHDWMKSFGIGSLVKGEVGAVEEYGVILNFKDHPDVVGLI
EHHQLGGNTVKVGSSVIGLVVDFSDGVVNVSLKPELVDSVSKDGKKKKRHRAAVLDLELN
EEVNAVVEIVKDSYVVFSVPEYNYAIGFAPLMDYNSQLLPHHNYDYGQRITVVVGSIPNS
DPSGRLILLPKASAQDSGLSSSKRAKKKSDHKVGSLVEAEIIDIKPLELILKFGANLHGR
VHITEVLEEHCCENPFSNLRIGQKIQARIVAEHSGKSGRNLKWELSVKPSVLKGSEELSL
LQAELDHYVNGIVRAYVVKVDKEWVWLTLSRDVMAHLFILDSSVEPSELKEFQQRYSVGQ
AVKGRVIGVNREQKLLRLKALDNQCMLENVKEQSVSSIAEHTREGDIIGGCIQRILPGVG
GLVIKIGPHLHGRVHYTEIVDSWVPEPLSEFHEGQFVKCKVLAVSRPSEGSVRVDLSLRS
SIICANSDHSRLVDDSATCTPRFEKIDDLCPGTEVKGYVKNVNAKGCFVMLSRMVEARII
LSNLSDEYVENPQKDFSVGMLVQGRVLSAEPISGKVEVSLRKSTGSKSQKSCDISYSDLH
VGGIIDGQVKRVESYGLFVTIQSSELVGLCHISELSDEPVLDINSCFKAGDMVKAKILKI
DVERHRVSLGLKKSYFDSDDERVPTDISHCPEMSGDLNMSFVLPGPEPRASVPPLQVSLD
ENEGSDQESGQKGHATANGTESNVKKSDKRLKEKTRKRKQREIEISALEDRALQKDKPQT
PDEFEKLVRSSPNSSFVWINYMAFLLDLADVEKARSVAERALRTINIREEEEKLNVWVAY
FNLENEYGSPREDAVKKIFQRALQYCDPKKVHLALLGMYERTKQHELADELFDRMTKRFK
TSCKIWLRRIHFSLSQQKDVEYIKSVVNRALLSLPQSKRIKFLSQTAILEFKCGVPEEGR
SRFELILREYPKRTNLWSVYLDQEIRVGDTEIIRALFDRVTCLSLPPKKMKFLFKKYLRY
EKSQGDEERIEHVKQKALEYVEILKA
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcacggagataggaagaaggggaagaagggacccgaccgcccgggcaagccg
gaactgcgtgctaatcgcaaggaattcaaaaaccaccacaaggaggatgccatagaggag
cagcagcagcctgcagctctcttcaacgctgccgacgacggcgatttcccgagaggagga
cgcagcctcctcagcagggatgagatggccgaggcgcgtacagaggccgaggcagagttc
gacaaggaggagaggacgggaaacaagaagaagaagaggaacgccaacgtctcgttaggg
atggacaccggtgacgacgacttggggaccctgttcggtagtgctaccactgggaagctc
ccacgatttgcgaatcgcataaccctcaagaatatttcacccaatatgaagctttggggt
gtagtaatcgaagtcaaccaaaaggacattatagtaagtctacctggtggaatgagaggg
tttgttcgcacagaggaagtttcggatatagctctgcatggaaataccagggataatgat
ggcactttatgtgctgaagttgtccatgttggtcagcttgtaccttgcatggttctgcga
gtggacgatgacaagaaagaaggaaaagtaaacaaacgggtttggttatcgttgcggttg
agccgcatgtacaagggtctttctctcgatgctatccaggacggaatggtactcactgcc
caagtgaaaagcgttgaggaccatggttacattctttatttcggagtatccaccttcact
ggatttatgccaaaagctgacaaagaaactgtgaagactgaatctggaaaactcatacaa
tgtgttgtcaaggcgattgataaacctcggtctattattcacttgagttccgatgaagac
ttgatctctaaatctattattaaagatctgaaaggcctttctattgatcatttaattcct
ggcatgatgatgagtgcacgtgtccattcagtccttgaaaatgggatcatgctatcattt
cttacttatttcactggaacagctgatatttttaatttgtcaaactcctttccctctggt
aattggaaagatgattacagtaagaataagaaggtaaacgcccggatcttatttgttgat
ccatcgacaagagcggttgggcttacattgaaccaacatttacttcgtcttaatgtaccc
cctattaatgttaaagttggagaaatttatgataaatcaagggtgctgaggatggataaa
agggctggtctttttctcgaaataccctctccaactccatcacctggatttgttagcata
catgatgtatcagacaaggatgtgaagaatgtggagaagaaatttagggaaggcagcttg
acacgtgtccgtgtactcggagtgcgacatcttgagggagttgcattaggcaccctaaaa
gacagcgcttttgaaggttctgttttcacccatgctgatgtcaaaccaggaatggtagtt
agagctaagattgttacagttgagcctttcggcgcaattgtgcagttttccagtggtgtg
aaagcactttgtccgcttcctcacatgtctgagttagacaatgttgtaaagccaccgaag
aaatttaaggttggagctgaactactttttcgtgtattgggttgcaaatccaagagaata
acagtgacatacaagaagtctctggtcaagtcaaaacttgaagtgttggcctcatatgct
gatgcaaagatcggtttagtgactcatggatggattactaaaatagaaaagcatggatgc
tttgtgagattttacaacggagttcagggttttgttagcagatctgagattggactagag
ccaggcactgaagctgaaagtgtttatcatgtcggacaagttgtcaaatgtagaattgtc
agtgtgatccctacttcaaggaaactaaatgttagttttgcaacatcttctaatagggcc
attcaagctgatactgcaaaggtgggtactattgtctctggtgttgtggagcgacttact
cctggagctgttgtcgtcagtgtcaatggcttctccaagggatctatactcaatgaacag
ttggcagattatcatggtcaagttgctcagttgaagaatttgttgaagcctggccacgag
ttcagccagcttttggttcttgatgccgaaggccaaaatttaattctttccgctaagccc
tcacttatcaacactgctaatgaaattccatcagagatatcacagatgcaagcgggagct
gtagttcatggctatatttgcaacattatagaggctggttgttttgttcgctttcttgga
cccctaactggtttctctcccaaggataaagcagttgataggccgattgaaaagctctcc
gatgcattctgtgttggccaatcagttcggagtcatgtcctcaatgtaaatgctgattct
gctcgggtgaagctttcactccaacagtccatgtgctcttcacctgattgttcctttatt
caaggatattttcttctggacaaaaagattgcggcattgaagtattcaggtcctagtact
tctcatgattggatgaaatcttttggcattggtagcttggttaagggggaggtgggagca
gtagaagaatatggtgttatccttaacttcaaagatcatccagatgttgttggtctaatt
gaacatcatcaacttggtggcaatactgtaaaagtggggtcttctgtgataggtctggtt
gttgatttttctgatggagttgtaaatgtatcccttaaacctgaactagttgacagtgtc
agcaaggatggaaaaaagaagaaacgtcacagagctgcggttttggacttggaacttaac
gaagaagtgaatgcagttgtagagatagtcaaagacagctatgtggttttttctgtcccc
gagtataattatgcaataggctttgctccattgatggattacaactcgcaactgcttcct
catcacaactatgattatggacagcgcattactgttgttgttggaagtatcccaaattct
gacccttctggaagacttatcctactcccgaaagcatcagctcaggattcgggtctctct
agttctaaaagagctaagaagaaatcagaccacaaagttgggtcacttgttgaagcagag
attattgatatcaagccacttgagcttattttaaaatttggtgccaatcttcatggaaga
gttcatattactgaggtccttgaagaacattgctgtgagaatccttttagcaatctcaga
atcgggcaaaagatccaagcaagaattgttgcagaacattcaggaaaaagtggaaggaat
ttgaaatgggaactatctgttaaaccatctgtgcttaaagggtcggaagaattaagtctc
cttcaagctgaactcgatcattatgttaatggcattgtgcgtgcttatgttgtcaaggtg
gataaagagtgggtctggttaactttatcaagagatgttatggctcatttgtttattctt
gatagttcagttgagcccagtgaattaaaagagttccaacagcgttatagtgtcggccaa
gcagttaaaggacgtgttattggtgtgaacagagagcaaaaattattgaggctgaaagcg
cttgataaccaatgcatgcttgagaatgtcaaagaacaatcagtctcttctattgctgaa
cacacgagggaaggagatatcattggtggatgcattcagaggattctacctggtgttggt
gggcttgtcatcaagatcggacctcatctacatggaagggttcattatactgaaattgtt
gattcatgggttcctgaacccctgtctgaattccacgaaggtcagtttgtgaaatgcaag
gtcctggctgtaagccgcccgtctgaaggttctgtccgagttgacctatcacttcgctca
tcaattatctgcgcaaatagtgatcactcaagattagttgatgattcggcaacttgcact
ccccggtttgagaagatagatgatctgtgccccggtacagaggttaagggttatgtgaag
aatgtgaatgccaaaggatgtttcgtcatgctttctcgaatggttgaggctaggattatt
ttgtcaaatttgtcagatgagtatgttgaaaatcctcagaaggatttttcagttggaatg
cttgtacagggaagggtcttgtctgcagaaccaatatcagggaaagttgaggtatcactt
aggaagagcactggtagcaaatcgcagaagtcgtgtgacattagctacagtgatctgcat
gttgggggcatcattgatggtcaagttaaacgggttgaatcctatggattatttgtgaca
atccagagcagcgaactggtgggcttgtgtcatatatcagaactttctgatgaaccagtt
cttgatattaactcttgcttcaaagctggtgatatggttaaagccaaaattttgaagatt
gatgtggaacggcatcgagtgtcccttggcctgaagaaatcttacttcgactctgatgat
gaaagggttcctacagacatcagccattgccctgagatgtctggagatttgaacatgagc
tttgttcttccgggaccagagcccagggcttctgttccaccacttcaggtctccttggat
gaaaatgaaggttctgaccaagagagtggtcagaaaggtcatgcaactgctaatggaact
gaatcaaatgtgaaaaagagcgataaacggttgaaggagaagacaagaaaaagaaagcaa
agggaaatcgaaatcagtgccttggaggacagggctttacagaaagataaaccgcagact
ccggatgaatttgagaagttggttaggagctctccaaatagtagcttcgtctggataaac
tatatggcatttttgttagaccttgcggatgttgagaaagcacgctcagtagctgaaagg
gccttgagaacaataaacattagagaggaggaggagaaactaaatgtatgggtagcatac
tttaaccttgaaaatgaatacgggagtccacgggaggatgctgtcaagaagatattccaa
agagcattgcagtactgtgatcccaagaaggtgcacttggctcttcttggaatgtatgag
aggactaaacagcacgaactggcagatgaactttttgatagaatgaccaaaagattcaaa
acttcatgcaagatctggttacgccgcattcatttttctctcagtcaacagaaggatgtt
gaatacatcaaatccgttgtaaaccgtgcgcttctaagcctgccacagagcaagcgcata
aagtttctttcgcagactgctatcctggagttcaagtgcggtgtgcctgaggaagggaga
tccagatttgagctgatcctacgggagtatccaaaaagaacaaatctttggagtgtttac
ctagaccaagagattcgagttggtgacacagagattatacgggcgttatttgatagggta
acatgccttagtcttcctccaaaaaagatgaagttcttgttcaagaagtacctgagatat
gagaagtctcagggcgatgaagaaagaatcgagcatgtgaagcagaaggcattggagtat
gttgagattttgaaagcctga
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