KEGG   Lolium perenne (perennial ryegrass): 127323149
Entry
127323149         CDS       T08650                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03030  DNA replication
lper03410  Base excision repair
lper03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127323149
   03410 Base excision repair
    127323149
   03420 Nucleotide excision repair
    127323149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lper03032]
    127323149
   03400 DNA repair and recombination proteins [BR:lper03400]
    127323149
Enzymes [BR:lper01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     127323149
DNA replication proteins [BR:lper03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    127323149
DNA repair and recombination proteins [BR:lper03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      127323149
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 127323149
NCBI-ProteinID: XP_051207295
LinkDB
Position
6:117045158..117069783
AA seq 2219 aa
MSGGDGRRRRPSVGGGGGGGGAVAGAGGWGGRRSGSSAAKEQRLRLGAEELLEGRLGFAP
YTEGDRRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQDGSTFKVKYKFPPYFYAATKDK
MEFEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRNDLL
HVVEKNEEERDAVDAFESIYGVKRVERPQDYINCIIDLREYDVPYHVRFATDKDVRSGQW
YNVTVSGSDVLLQRREDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSVMMISYMIDGQGY
LIINRECVGEDIEDLEYTPKPEFEGHFRVKNVADEVGLLKAWFSHMQEVKPGIYVTYNGD
FFDWPFLEKRAAHHGIKMNEEIGFQCDSNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGL
KAVTKAKLGYDPLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATI
IPMSPDEVLRKGSGTLCEMLLMVQAFKANIICPNKHQADLEKFYNNRLVESETYIGGHVE
CLETGVFRSDLPTKFQLEPSAFEQLIENLDRDLQYAIAVEGKLDIHSVTNYDEVKDAIKQ
KLVSLRDHPTREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDVDCTACDFNRPGKNCLR
TLEWVWRGETYMAKKSDYHHIKRQIESEMIQAGGVTSSKPFLDLSKPEHLLKLKDRLKKY
CQKAYRRVVDKPITEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLAEAKAS
GNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQN
ARLLVDKIGRPLELDTDGIWCVLPGSFPENFTFKTKAEKKLTISYPCVMLNVDVARTNTN
DQYQTLKDPVNKLYTTNSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNEDGTLAE
LKGFEIKRRGELKLIKVFQAEVFDKFLHGSTLEECYAAVASVANRWLDLLDNQGIDISDS
ELLGFISESSTMSKSLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQGT
PVSERAVPVAIFETDAEIAKFYLRKWCKVSTEANIRFILDWSYYKQRLSSAIQKIITIPA
AMQKISNPVPRVLHPDWLHKKVREKDDRFRQRKLRDMFSPLEKDRVMQNLNGTGDIEDLL
TSDKGLTKTTASHGFNSGKENHLNRSPSAEGGSDHRKNQQKSVTRSNEPLRDDSADERVD
RSTDYQGWLDARKRKWKYVHEQKKRRRLGGAASSEGPTNNLFSARIGSQLHANGRNRSTF
FQKQELSLFRSHWQIIQLSTSTLPGRFFAWVVADGIMFKIPINVPRVFYLNSKAPVTDEF
PGRRVKKILPHGRPSFNLIEVVTSEEQFRAEGRKLAAHLAEPDVEGIYETKIPLELNAIL
QIGCVCKVDKSAKKRSIQDGWDLAELQMKTTAECSYLEQTVSFFYLYHSLSEGRAVYVMY
FPTSSRIHAVVVNPFRNKELSPAFLEKQFRDACQTPGPLHENLTSHVDYHTSIDAGSKFV
QKMLLEYRQQHPGPVIGIIECPKLQALRESVRALDDFPCVTIPCNARDNNYQALGWQATA
GRTSMQRCAASTQWFNERISLARYAHVPLGNFELDWLLFTADVFFSRALHDQQQVLWISD
DGIPDLGGTCEGDTCFADEVIQPALTYPGAYRRVSVELKIHHLAVNSLLKSSQVDEMEGG
SIGSFENDIPPGSNATETDFNDASLCQPAFQVLKQLIQRCISDAVSSGNVFADAILQHLY
RWLCSPRSKLHDPAIHRLLHNVMKKVFALLLAEFRKLGANVIFANFSKIIIDTGKVDLPS
AHAYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQYNYGGIQAKTQNVTSADSSDGDN
DIDIVSSWNIAEYLPKATQDHFVLIVSEFLYVPWKYMNEQVACRAATRDDTSCTPSITIM
AAENLEGQVVDYLRAQIGTYFAEKLLTIVSDILLHFKGKGKSESAESANREPDSHTHKGD
AALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICS
YCNDCRDLDLCRDSALQGQEWRCAVPQCGQPYHREQMENALLQVVRQRERLYHLQDLVCV
RCRQVKAAHVSEQCSCGGSFRCKEESSYFLTKMRVFLNVAVSQKFELLQDCVKWILEVR
NT seq 6660 nt   +upstreamnt  +downstreamnt
atgagcggcggcgatggtcggcgacggagaccgtcggtcggaggaggtggaggcggtggc
ggcgccgtcgccggcgccggcggctgggggggtcggaggtctggatcgtcggcggccaag
gagcagcggctacggctaggggcagaggagcttctcgagggccggcttggcttcgcaccc
tacaccgaaggcgaccgccgacttggctggctcctgaccttctccccctcatcatgggag
gacgaggatacagggaaaatctacagctgtgttgacctctactttgtgtcccaggatggt
tctacgttcaaagtgaagtacaagttcccaccttacttttatgctgcaactaaggacaag
atggagtttgaagttgaggcgtatctcaggcgacgttatgaaggggaaattgctgatata
gaaataattgagaaagaagatctggaccttaaaaaccatctttctggtttgaagagaaaa
tacttgaagattcagtttgataccgtgcaacaattaatgcgcgtgaggaatgacctattg
catgttgttgaaaagaatgaagaagaacgagacgctgtggatgcatttgaatcaatttat
ggtgtaaaaagggtagaaaggccacaggattacataaattgcatcattgatttacgtgaa
tatgatgttccctatcatgttcgttttgctacagataaggatgtaagatctgggcagtgg
tacaatgttactgtatctggttccgatgttttgctgcagagaagggaagatctgcttcag
cgtgcagaagttcatgtatgtgcatttgatattgagaccacaaagctgcccctaaagttt
cctgatgctgaatatgacagcgtaatgatgatctcctacatgattgatgggcaagggtac
ttgataatcaaccgagagtgtgtaggggaagatattgaagatttggagtacacacctaaa
ccagaattcgaggggcattttagagttaagaatgtcgcagacgaggtgggtctacttaaa
gcttggttttctcacatgcaagaggttaagcctggtatttatgttacatataatggcgac
ttttttgattggccgtttttggagaagagagctgctcatcatgggataaaaatgaatgag
gagattggtttccaatgcgacagtaatcaaggggaatgtcgagctaaattctcctgtcac
cttgactgttttgcctgggtgaagcgagacagttaccttccacaggggagccaaggtcta
aaggctgttacaaaagccaagcttggttatgatcctctcgaagtcaatccagaagatatg
gttcgctttgcaatggagcagccacagacaatggcttcttattctgtatcagatgctgtt
gcgacatactacttatacatgacttatgtccatccatttattttctcccttgcgacaata
atacctatgtcacctgatgaagtattgcggaaaggaagtgggacactttgtgaaatgctg
ctaatggtccaggcattcaaggccaatatcatttgtcctaacaagcaccaagctgatctg
gagaagttctacaataaccgtctagtagaaagcgaaacatacatcggtggtcatgttgag
tgccttgaaactggtgtatttagatctgatcttcctacaaagtttcagcttgaaccctca
gcatttgagcaattgattgaaaatcttgatcgtgatctgcaatatgccattgctgtcgaa
ggaaaattggatattcattctgtcacaaattatgatgaagtcaaggatgccataaagcaa
aagctcgtttcgttgcgagaccacccaactcgtgaagaatgtcctcttatatatcatctg
gatgttgctgcaatgtatccaaatatcattttgacaaataggctccagccgccatccata
gttacagatgtggactgcacagcatgtgatttcaatcgccctggaaagaattgccttaga
acgcttgaatgggtctggcgaggagaaacctacatggcaaaaaagagtgactatcatcat
ataaagagacaaattgaatcagagatgattcaagctggtggggttacatcttcgaagcct
ttccttgacctctcaaaaccagagcatttactaaaactgaaggatcgtttgaagaagtac
tgccagaaggcgtatagaagagttgttgacaagccaattacagaagttagagaagctgga
atatgcatgcgcgaaaattctttctatgtagatacagtccgaagcttccgtgatagaagg
tatgaatacaaaggcctgaataaaacatggaaaggaaaactggcagaagcaaaagctagt
ggaaattctatcaaaattcaggaagcacaggacatggttgtgctatatgattcgttgcaa
cttgctcacaagtgcatattgaattctttttatggatatgttatgcgcaagggtgcaaga
tggtactctatggaaatggctggtgttgtaacatatactggtgcgaagatcatccaaaat
gctcgattacttgtagataaaattggaagaccactggaacttgacacagatggcatttgg
tgtgttttgcctggttcttttccagagaattttactttcaagacaaaagctgagaagaag
ctcacgatatcttacccctgtgtgatgcttaatgttgatgtcgcaagaaccaacaccaat
gatcaatatcaaacactgaaagatccagtaaataagctatatacaacaaacagtgaatgc
tccatcgaatttgaggtagatggaccatacaaggctatgatcctacctgcctctaaagag
gaagggattctgataaagaagaggtatgctgtgttcaatgaagatggcaccctggcagaa
cttaaaggttttgagatcaagcgtcgaggtgagctgaagctcatcaaagtttttcaggcg
gaggtatttgataaatttctccacggttcaactttagaggaatgctatgcagctgttgcc
tctgttgctaaccgttggttagatctactggacaatcagggaattgatatttctgacagc
gagttgcttggcttcatatcagagtcaagcacaatgagtaaatccctagttgactatgga
gaacagaagtcatgtgctgtaactacagcaaaaagacttgctgaattccttggagactca
atggttaaagacaaaggactgcactgccaatatatagttgcccgagagccacaaggtact
ccagtgagcgagcgtgctgttccagtggctatttttgagacagatgctgaaatagcaaaa
ttttatttaagaaaatggtgtaaagtctccacggaggcaaacatccgatttattcttgat
tggtcttactacaagcaacgcctaagctcggctattcagaaaatcataactattcctgca
gcaatgcaaaagatttcaaatcctgttccccgagttcttcatcctgactggctgcacaaa
aaagtgagagagaaggatgatcgatttcgccaacgcaaactacgtgatatgttcagtccc
ttggagaaagacagggtgatgcagaacttgaatggaactggagacatagaggatttattg
acatcagacaaaggtctgacaaaaactactgcatcccatggttttaacagtggcaaagaa
aatcatctgaataggtctccatccgcagaaggtggttcagatcataggaaaaaccagcaa
aaatctgtaaccaggtcaaatgagccactccgagatgactctgcggatgaaagagttgat
agaagtactgattatcaaggatggcttgatgctaggaagagaaaatggaaatatgttcat
gaacagaagaaacgtcgaaggttgggtggtgcagcctcttccgagggtcccactaataac
ttgttttctgcaagaattggcagtcagttgcatgctaatggcaggaatcgttctacattt
ttccagaaacaggaattgtccctctttagatcacattggcagataatccagctttctaca
agtacattgcctggccgtttttttgcgtgggttgttgctgatgggatcatgttcaagatt
cctatcaacgtgcctagagttttctacctaaactcgaaagctcctgtcacagacgaattt
ccaggaaggcgtgtaaagaagattcttcctcatggaaggccatctttcaatctcattgag
gttgttactagtgaagaacagttcagggctgaaggaagaaaacttgctgctcatcttgca
gagccagatgtcgaaggcatatacgagacaaaaattccactggagcttaatgctattctc
caaattggctgtgtctgcaaagtggacaagtctgcaaagaaacgtagtatccaagacgga
tgggatcttgctgagttgcaaatgaaaacaactgcagagtgctcatacctggaacaaaca
gtttcatttttctatctataccacagcttgtctgaaggaagggctgtatatgtcatgtac
tttcctacatcttccagaatacatgcggtggttgtcaatcctttccgtaataaagaacta
tctccggcatttctcgaaaagcaatttcgggatgcttgccaaactcctggccctttgcat
gaaaatcttacttcccatgtggactaccacacatctattgatgcaggtagcaaatttgtg
caaaaaatgttacttgagtacagacaacagcatcctggacctgtcataggcatcatagaa
tgccctaaactccaagctttaagggaatcagtacgagcacttgatgatttcccatgtgta
accattccttgcaatgcacgggacaacaactatcaggctcttggttggcaagcgacagct
ggtagaacaagcatgcagcgctgtgctgcatcaacccaatggttcaatgaaagaatttca
ctcgctagatatgcacatgtgccattgggaaactttgaacttgattggcttctttttact
gctgatgtgtttttctcaagggcattgcatgatcaacagcaggtactatggatatctgac
gatggtattcctgatttaggaggcacgtgtgaaggagatacatgctttgctgatgaagtc
attcagcccgcgctaacatatcctggcgcttatagaagggtttctgttgagcttaagatt
catcatctggcagttaattctctccttaagagcagtcaagtggatgaaatggaaggagga
tctatcggcagctttgaaaatgacattcctcctggttcaaatgccactgaaactgacttc
aatgatgccagcttatgtcaacctgctttccaagtgctgaagcaactcattcaaagatgc
atctcagatgcagtgtcttctggaaatgtatttgctgatgcaatattgcaacatctgtac
cgttggctttgcagcccacgatcgaaacttcatgacccagctatccatcgcctccttcat
aatgtcatgaagaaggtctttgctctattgttagctgagtttcggaagcttggagctaat
gttatctttgcaaacttctctaagataatcatagatactggaaaggtggacttgccatca
gcacatgcatactgtgatagcttgctaaaaaccttacagacaagggatctttttgagtgg
atagagttggaacctttgcactattggcattccttactgttcatggatcagtataactat
ggcgggattcaggctaaaacacaaaatgtaacatctgccgacagttcagatggtgataat
gatatcgacattgtgtctagttggaacattgcagaatacttacccaaagctacacaggat
cactttgtcttgatcgtatccgagttcctatatgttccatggaaatacatgaacgaacaa
gtagcttgtcgagctgctacgagggatgatacctcatgtactccgtctataacaatcatg
gctgctgagaatcttgagggccaggttgtagattaccttcgtgcgcagatcggtacttac
tttgcagaaaagcttcttacgattgtgagtgatatacttctccattttaaaggaaaaggc
aagtctgaatcagctgaatctgcaaatagggagcctgattctcacacacataaaggcgat
gctgcattagagttcattaaacatatatgtgctgttcttgctctcgatcagaatgttcag
catgatatattgagaatgagaaagaacttgttgaagttggttcgtgtaaaggaattcgct
ccagaggcacaattccaagatccctgtgcatcattcactctcccaaacgtgatctgcagc
tattgcaatgattgccgggatcttgatctctgccgtgattcagcactccaaggtcaggag
tggagatgcgcggtaccacaatgtgggcagccataccaccgcgagcagatggaaaatgca
cttctacaggttgtgcgtcagcgagagaggctataccacttgcaggatttggtctgtgtc
cgctgcaggcaagtgaaagcagctcatgtatctgagcagtgctcctgtggaggctcattc
cgctgcaaggaagaatcgtcatacttccttaccaagatgcgggtcttcctaaatgttgcc
gtcagtcaaaagtttgagttgcttcaggattgtgtcaaatggattctggaagtcaggtga

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