Lolium perenne (perennial ryegrass): 127323438
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Entry
127323438 CDS
T08650
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127323438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127323438
03016 Transfer RNA biogenesis [BR:
lper03016
]
127323438
Enzymes [BR:
lper01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
127323438
Messenger RNA biogenesis [BR:
lper03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
127323438
Transfer RNA biogenesis [BR:
lper03016
]
Prokaryotic type
tRNA degradation factors
127323438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
127323438
NCBI-ProteinID:
XP_051207537
LinkDB
All DBs
Position
2:160307923..160325041
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AA seq
892 aa
AA seq
DB search
MLASPATLRHLLLPAPPHLAFGTPNPAPPLHAWLPISRLAPPRVAHASSRRPRRRDARAR
AVAAAGEEAAAPAEEASSSGPTKFSVKIPVGDRHILVETGQIGRQASASVMVTDGETIVY
CSVCMADTPSDPSDFFPMSVHYQERLSAAGRTSGGFFKREGRAKDHEVLVCRLIDRPLRP
TMPKGFYYETQILSWVFSYDGIHSPDCVAVTAAGIAMALSEVPNKQTIAGVRIGMINDQF
VVNPTTEQMEDSELDLMMAGTDSAILMIEGFCDFLTEEKLLQAVETGQEAIREICKAIDV
LVKTCGKKKMVEAINLPPPELYRHVEDISGDELVKALQIKQKIPRRKTLSALEEKVITIL
SEQGYVSKDESSGPIENVADIVEEEDEDEIIEDGEVDEGDVHIKPVSRKPHRQLFSEVDV
KLVFKEVSSKYLRRRIVEGGKRSDGRSPCELRPINSQCRLLPRAHGSALFTRGETQALAV
VTLGDYQMAQRIDTLVDTEESKSFYLQYTFPPSSVGEVGRTGAPNRREIGHGMLAERALE
PILPSEKDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLET
QQFGGDGTPLILSDITGSEDASGDMDFKVAGNDHGISAFQMDIKVVGITLAVMEQALRQA
RDGRKHILNEMSKCSPPPAKALSPYAPVIHIMKVKPNKVSLIIGSGGRTIKSIIEETGVY
GIDARDDGTVKITARDIESLEKSKTIIANLTMVPKVGEIFRNCEIKTIAPYGAFVEIAPG
REGLCHISELSSSWLAKAEDAYKVGDRIDVKLIEINDKGQLRLSCKALLPDANQEPGSNK
QQVSGPTKEKIVYKDDIIKVTTRRSRRKKEGEPSAAENATSKTLENSTAENA
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgagccctgccacgctccgccatctcctcctcccggcgccgccgcacctcgcc
ttcggtaccccgaaccccgcgccgccgctccacgcgtggctccccatctcccgcctcgcg
ccgccgcgcgtcgcgcatgcctcctcgcgccgaccgcgacggagggatgcgagggctagg
gctgtcgctgctgcaggagaggaggcggcggcgcccgcggaggaggcgagcagctccggc
ccgaccaagttctccgtgaagattcccgtcggcgaccgccacatattggtagagacgggc
cagattgggaggcaagcgagcgcgtctgtaatggtcactgatggagaaacaattgtctac
tgttctgtttgtatggctgatactccaagcgacccttctgattttttcccaatgtcagtt
cactatcaggagcgcctttcagctgctggaagaactagtggcggtttctttaaacgagaa
ggaagggcaaaagaccacgaggttttagtatgcagattgatagataggcctctacgccct
actatgcccaaggggttctattacgaaactcagattctatcctgggttttcagttatgat
ggtattcattcccctgattgcgtggctgtgacagctgctggtatagccatggcactctct
gaagttccaaataaacaaacaattgctggcgtaagaatcggtatgattaacgaccagttt
gttgttaacccaaccactgaacaaatggaggactcggagttggacttgatgatggctggg
accgatagtgctatattgatgatagagggattctgtgattttctcactgaggagaagctg
cttcaagccgtggaaacaggacaggaggcaattcgagaaatctgcaaggcaattgatgtt
cttgtcaagacctgtgggaagaagaaaatggttgaggctatcaatttaccaccccctgaa
ctctacaggcatgttgaagatatctctggagatgagttagtgaaggcattgcaaataaaa
caaaaaattcctcgaaggaaaactctttcagcactggaggagaaagtaataactatactg
tcagaacaaggctatgtgtccaaagatgagtcatctggacccattgaaaatgtagctgat
attgttgaggaggaagatgaggacgaaattatagaggatggtgaagtggatgaaggtgat
gttcacatcaagccagtgtcaaggaagccccaccgtcagttattctcagaagttgatgtc
aagctagtcttcaaggaagtgtcatccaaatatttgcgaaggcggattgtagagggtgga
aagcgaagtgatggacggagtccttgtgagcttcggcctattaattctcaatgtagatta
cttccacgggcacatggcagtgcactgttcacaaggggagaaacacaggcactggccgtg
gtcactttaggtgactatcagatggctcaaagaattgatacccttgttgacaccgaggaa
tcaaaaagtttctatcttcagtacacattcccgccatcatctgttggtgaagttggtcga
actggagcacctaataggagagagataggtcatggtatgcttgcagaaagggcgctggaa
ccgattttaccttcagaaaaggactttccgtacaccattcgtgtggagagtactatcact
gaaagtaatggctcatctagcatggcttctgtctgtggaggttgtttagcacttcaagat
gctggtgttccaataaagttccctgtagctggaatagcaatgggcttggttcttgaaact
cagcaattcggtggagacggtacaccacttattctttctgatattactggatctgaagat
gcctctggtgacatggatttcaaggttgccggtaatgatcatggtatttctgctttccaa
atggacatcaaggtggtgggaataactctagctgtaatggaacaagcacttcgtcaagct
agagatggtagaaagcatattctaaatgaaatgtcaaaatgttcacccccaccagctaaa
gcactgtctccctatgctcccgtaatacatattatgaaggtcaaacctaacaaggtgagt
ttaataattggttctggcggaaggacaataaaaagcataattgaggagaccggagtatat
ggtattgatgcccgagatgatggcacggtaaaaattactgcaagggacatagaaagctta
gagaagtcaaaaactataatagctaatcttaccatggttccaaaagttggagaaattttc
aggaactgtgagatcaaaacaattgctccctacggagcttttgtggaaattgcacctggg
cgtgagggtttatgtcatatcagcgagttaagttcgagttggttggccaaggctgaggat
gcttataaagttggagatcgtattgatgtcaagcttattgagataaatgacaagggtcaa
cttcgactaagttgcaaagccttgcttcctgatgcaaaccaagaaccaggcagcaacaag
cagcaagtgagcggtccgacgaaagaaaagatagtgtacaaagatgatatcattaaggtg
accacaagaagatccagacgcaagaaagaaggtgagccgtctgcagctgaaaatgccaca
tcaaagacccttgaaaacagcacagccgaaaatgcctaa
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