KEGG   Lolium perenne (perennial ryegrass): 127325841
Entry
127325841         CDS       T08650                                 
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03420  Nucleotide excision repair
lper04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127325841
  09124 Replication and repair
   03420 Nucleotide excision repair
    127325841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lper04121]
    127325841
   03400 DNA repair and recombination proteins [BR:lper03400]
    127325841
Ubiquitin system [BR:lper04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     127325841
DNA repair and recombination proteins [BR:lper03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      127325841
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_EML WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 127325841
NCBI-ProteinID: XP_051208636
LinkDB
Position
3:complement(10430990..10435055)
AA seq 571 aa
MATRARFVYTRRRADDDEEEEQQEASSSSSEDEQEEEEAEGSDEEGVAEEEEAVAEEPPA
RKAPTPAATGRDGRKGPITISLKKVCKVCKKTGHEAGFKGAVYIDCPMKPCFLCKMPGHT
TLTCPHRVAMEHGVIPAPRRNTNTSLDYVFQSQVKGKISMVKPRFLVPNQLECGNIKFHQ
RRVTCLEFHPTKNNVLLSGDKKGLLGIWDYVKLHEKITYDSVHSCILNSMKLDTANDGVL
YTASSDGTISSTDLDTGMGSPLLNLNPDGWNGPSTWRMIYGMDLNAEKGLLLVADSFGFL
YLLDRRSKERIGQPILIHKKGSKVTGLHCNPAQPEVLLSSGNDHFARIWDTRKLEPKSAL
ASLAHGRVVNSGYFSPRSGNKILTTCQDNRIRVWDYIFGNLESPSREIVHSHDFNRHLTP
FKAEWDPKDYSETVAVIGRYISENHNGVALHPIDFIDTSTGKLLAEVMDPDITTISPVNK
LHPQDDILATGSSRSIFIWKPKNDSDDDPTEERTSQKVKEYVYGSGSRKKANGKRGDSSD
DDSDGGSDGKNKKAKKTRFTHTVKGKGKSKA
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggcgacccgcgcccgcttcgtctacacccgccgccgtgccgacgacgacgaggaggag
gagcagcaggaggcctcatcatcttcctctgaggacgagcaagaggaagaggaggccgag
ggttccgatgaggagggggttgctgaggaggaggaggcggtcgccgaagagccaccggcc
aggaaagccccaactccggcggctacggggagggacgggaggaagggcccgattaccatc
agcctcaagaaagtgtgcaaggtgtgcaagaagacggggcacgaggcggggttcaagggc
gccgtgtacatcgactgccccatgaagccctgcttcctttgcaagatgccagggcatacg
accttgacctgcccgcacagggtagcaatggaacatggtgttatcccagcccctaggagg
aacacaaacacttcgctggactacgtcttccagagccaagtgaaaggcaaaatttccatg
gtcaagccgcggtttctggtacccaatcaattggagtgcggtaacataaaatttcaccag
agacgcgtgacctgcttggagtttcatccaactaagaacaatgtgcttttatcaggagac
aagaaagggctactaggcatttgggattatgttaagttgcatgagaagatcacctatgat
tctgtgcattcctgtattctaaacagtatgaagctggacaccgccaatgatggagtgcta
tacacagcctcctctgatgggactatcagtagcacagacttagacacaggaatgggctct
ccgttgttaaatcttaacccagatggttggaatggtccaagcacttggcgcatgatatat
ggaatggacttaaacgccgagaaaggccttctattggtggcagatagttttgggtttctt
tatttactggatagacgatctaaggaaagaatcgggcaaccaattcttatacataaaaag
ggtagcaaggtaactggcctccattgcaaccctgcacaacctgaagttcttctaagcagc
ggaaacgatcactttgcccgtatttgggatacgaggaaacttgagccaaagagcgctctt
gccagccttgctcatggacgggttgttaattcaggatatttttctccacgaagtgggaac
aagatcttgacgacatgtcaggacaaccgaattcgtgtctgggattatatttttggtaat
ctggaatccccgagtagagaaatcgtgcacagccatgatttcaaccgtcacttgactccc
ttcaaagctgagtgggatccaaaggattattcagaaactgttgctgttattggtcgttac
ataagtgaaaaccacaacggggttgctctacatcccattgatttcatagacaccagcact
ggcaagcttctggctgaggtgatggatcctgacataacgactatcagcccagtgaacaag
ctacacccccaagacgatatactggccacaggaagttcaaggtccatcttcatctggaaa
cctaagaacgattctgatgatgatcctacagaagaaaggaccagccaaaaggtcaaggaa
tatgtgtacgggtctggttcgcggaagaaagcaaatggcaagcgcggcgatagcagcgat
gacgactcggatggcggttctgacggaaagaacaagaaagcgaagaagactcggtttacc
cataccgtgaagggaaagggcaaatccaaagcttga

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