Lolium perenne (perennial ryegrass): 127325841
Help
Entry
127325841 CDS
T08650
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03420
Nucleotide excision repair
lper04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127325841
09124 Replication and repair
03420 Nucleotide excision repair
127325841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127325841
03400 DNA repair and recombination proteins [BR:
lper03400
]
127325841
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127325841
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
127325841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
127325841
NCBI-ProteinID:
XP_051208636
LinkDB
All DBs
Position
3:complement(10430990..10435055)
Genome browser
AA seq
571 aa
AA seq
DB search
MATRARFVYTRRRADDDEEEEQQEASSSSSEDEQEEEEAEGSDEEGVAEEEEAVAEEPPA
RKAPTPAATGRDGRKGPITISLKKVCKVCKKTGHEAGFKGAVYIDCPMKPCFLCKMPGHT
TLTCPHRVAMEHGVIPAPRRNTNTSLDYVFQSQVKGKISMVKPRFLVPNQLECGNIKFHQ
RRVTCLEFHPTKNNVLLSGDKKGLLGIWDYVKLHEKITYDSVHSCILNSMKLDTANDGVL
YTASSDGTISSTDLDTGMGSPLLNLNPDGWNGPSTWRMIYGMDLNAEKGLLLVADSFGFL
YLLDRRSKERIGQPILIHKKGSKVTGLHCNPAQPEVLLSSGNDHFARIWDTRKLEPKSAL
ASLAHGRVVNSGYFSPRSGNKILTTCQDNRIRVWDYIFGNLESPSREIVHSHDFNRHLTP
FKAEWDPKDYSETVAVIGRYISENHNGVALHPIDFIDTSTGKLLAEVMDPDITTISPVNK
LHPQDDILATGSSRSIFIWKPKNDSDDDPTEERTSQKVKEYVYGSGSRKKANGKRGDSSD
DDSDGGSDGKNKKAKKTRFTHTVKGKGKSKA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccgcgcccgcttcgtctacacccgccgccgtgccgacgacgacgaggaggag
gagcagcaggaggcctcatcatcttcctctgaggacgagcaagaggaagaggaggccgag
ggttccgatgaggagggggttgctgaggaggaggaggcggtcgccgaagagccaccggcc
aggaaagccccaactccggcggctacggggagggacgggaggaagggcccgattaccatc
agcctcaagaaagtgtgcaaggtgtgcaagaagacggggcacgaggcggggttcaagggc
gccgtgtacatcgactgccccatgaagccctgcttcctttgcaagatgccagggcatacg
accttgacctgcccgcacagggtagcaatggaacatggtgttatcccagcccctaggagg
aacacaaacacttcgctggactacgtcttccagagccaagtgaaaggcaaaatttccatg
gtcaagccgcggtttctggtacccaatcaattggagtgcggtaacataaaatttcaccag
agacgcgtgacctgcttggagtttcatccaactaagaacaatgtgcttttatcaggagac
aagaaagggctactaggcatttgggattatgttaagttgcatgagaagatcacctatgat
tctgtgcattcctgtattctaaacagtatgaagctggacaccgccaatgatggagtgcta
tacacagcctcctctgatgggactatcagtagcacagacttagacacaggaatgggctct
ccgttgttaaatcttaacccagatggttggaatggtccaagcacttggcgcatgatatat
ggaatggacttaaacgccgagaaaggccttctattggtggcagatagttttgggtttctt
tatttactggatagacgatctaaggaaagaatcgggcaaccaattcttatacataaaaag
ggtagcaaggtaactggcctccattgcaaccctgcacaacctgaagttcttctaagcagc
ggaaacgatcactttgcccgtatttgggatacgaggaaacttgagccaaagagcgctctt
gccagccttgctcatggacgggttgttaattcaggatatttttctccacgaagtgggaac
aagatcttgacgacatgtcaggacaaccgaattcgtgtctgggattatatttttggtaat
ctggaatccccgagtagagaaatcgtgcacagccatgatttcaaccgtcacttgactccc
ttcaaagctgagtgggatccaaaggattattcagaaactgttgctgttattggtcgttac
ataagtgaaaaccacaacggggttgctctacatcccattgatttcatagacaccagcact
ggcaagcttctggctgaggtgatggatcctgacataacgactatcagcccagtgaacaag
ctacacccccaagacgatatactggccacaggaagttcaaggtccatcttcatctggaaa
cctaagaacgattctgatgatgatcctacagaagaaaggaccagccaaaaggtcaaggaa
tatgtgtacgggtctggttcgcggaagaaagcaaatggcaagcgcggcgatagcagcgat
gacgactcggatggcggttctgacggaaagaacaagaaagcgaagaagactcggtttacc
cataccgtgaagggaaagggcaaatccaaagcttga
DBGET
integrated database retrieval system