KEGG   Lolium perenne (perennial ryegrass): 127326288
Entry
127326288         CDS       T08650                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127326288
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lper03021]
    127326288
Enzymes [BR:lper01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     127326288
Transcription machinery [BR:lper03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     127326288
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 127326288
NCBI-ProteinID: XP_051209104
LinkDB
Position
7:complement(186798993..186808309)
AA seq 1230 aa
MEEPQTDDQPLPNGPDTELDVTDFTVLGSDVEVKFHVKEDAKGGQQPSPDSDADSGQCPM
DVDLKVIPPVEDEGEIKSSTVPRAQVPIDMSVESLEKFCKEAARSFFSERGLISHQINSY
NDFVSHGLQELFDSLGETTVEPDYDPSKKMGAWRHATIKFGRVKLEKPEFWADNSDLDEQ
TLKLKPVHARLQNMTYSSKINVEMTVQVYSLGPSEKSKTGKDPYIQKKVILPPETKWVTI
GKLPVMVKSKLCWLHELKETECQYDSGGYFLIKGTEKAFIAEEQKCLSRIWVSNQRGWDA
CYLSQLKRERIYVKLVDSKEGDDFRKVVNLSFLGATIPIWIMFFALGVSSDKEAFEMIDI
QDCDSSLVNIISATIKESREQCKGFCGGDRARQLVDEFIRKTKFPPEDSFDGYVAKYLFP
GVGNNRCKALFLGYMMKCLLMSYSGQRKCDNKDDFRNKRLDLACQLLRRELWVHLRHAER
RMVKIMQRHLCGEGDLQVLDHYIDATIVTNGLNRAFSTGSWRHPYLYARCSGIVATLRRA
NPLQMMSDLRKTRQLSSYWGGAGDARYPNPSYWGKLCFMSTPDGEKCGFVKNLAVSAVVS
SVMRESLLDLFVSCGMKKLDEVLLQELGGKDKIFLNGNLVGMSAYPGEFVTHLRNMRRSK
QIDPQVEIKRDKQHKEVRVFSDAGRLLRPLLIVENLKNITKPKGGSYSFGELMDQNIIEL
IGVEEEEDIRCACGVRDLLSGDKKEGLLYYTHCELDPSFVLGLSCGIIPFANHNAARRVL
MQAEKLSQQAIGYSSTNSQYRADTLFHQLYYPQRPLFKTVVSDCLGKKNHNRPEFFNGQN
AIVSVSIHQGFNQEDSLVLNRASLERGMFRTFHFKSYKAQIENKEVTRRLKHREKVEFGK
TQSKKGRVDSLDIDGLPYVGASLQSGDIVIGKVSESGEDHSMKLMHTEKGMVEKVVLSAN
DDGKNSAVVTLRQARSPCVGDKFASMHGQKGVVGLLDSQENFPFTCQGIVPDIVINPHGF
PTRQTPGQLLEAALGKGIALGGMTKYATPFTTPSVDVITEQLHKAGFSRWGGESVLNGHN
GERMQSLVFIGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVVDKKRFGGVKFGEMERDC
LLAHGATANLHERLFTLSDLSQMHICQGCERVANVIMRPVEGGKTVRGPYCGFCKSVENI
LQIKVPYGAKLLYQELFSMGICLKFETEAS
NT seq 3693 nt   +upstreamnt  +downstreamnt
atggaggagccgcaaacggacgaccagccattaccaaatggaccagatactgagcttgat
gtcacggacttcacggttttgggttccgatgtagaagtgaagtttcatgtaaaagaggat
gcaaaaggtgggcaacagccatctcctgattctgatgccgattcagggcagtgccctatg
gatgtggatttgaaagtaataccacctgtggaagatgaaggggaaatcaagtcttctacg
gtcccacgtgcgcaagtaccaattgacatgagtgttgaaagcctggagaagttttgtaaa
gaagcagcaagatcattcttcagtgaaagaggactaatcagtcatcagataaactcctat
aatgattttgtctcccatggactccaagagctctttgattctctaggggaaactactgtt
gagcctgattatgatccttcaaagaagatgggtgcctggagacatgcaaccatcaagttt
ggcagagtgaagcttgagaagccagagttttgggctgataatagtgatctcgatgagcag
acactcaaactgaagcctgtacatgctcgcctccagaacatgacatattcttctaaaatc
aatgtagaaatgactgttcaggtttattcactcgggccaagcgaaaaatcgaaaaccgga
aaggatccgtatatccagaagaaagttatattacctccagaaactaaatgggtcaccatt
ggcaagttgcctgtcatggtgaagtcaaaattgtgctggctgcatgaacttaaggaaact
gagtgccagtatgattctggtggatattttctaatcaagggaacggaaaaggcatttatt
gctgaagaacagaaatgcttatccaggatttgggtcagcaaccaacggggctgggatgct
tgttacttgtctcaactcaaacgagaaaggatctatgttaagcttgttgattctaaagag
ggtgacgatttccgcaaagtggtcaacctgtccttcttgggtgcgactataccaatatgg
ataatgttttttgcactaggtgtatcatcagacaaggaggcttttgagatgattgacata
caagattgtgattcttctttggtcaacataatatcagcaaccattaaagaatcccgcgaa
caatgcaagggcttctgcggaggagatagagcccgccaacttgttgacgagttcatcaga
aaaacaaagtttccgccagaagattcatttgatgggtatgttgccaagtatctgtttcct
ggtgtgggcaacaataggtgcaaggcacttttcttgggttacatgatgaaatgtctgcta
atgtcctactctggtcaacgcaaatgtgataacaaggatgatttccgtaacaagaggcta
gatctagcatgtcagctgcttcgtagagaactttgggtacatcttaggcatgcagagaga
cgcatggttaagataatgcagagacatttgtgtggtgaaggtgacttacaagttctcgat
cattatattgatgccacgattgttaccaatggtctgaaccgtgccttctccactggttct
tggcgccatccatatttatatgcaaggtgctcagggattgttgcaacccttaggagagca
aatccgcttcaaatgatgtctgacttgaggaagactagacaattatcttcatactgggga
ggagctggagatgctagatatccgaatccctcctattggggaaagctgtgtttcatgtcc
actccggatggtgaaaaatgtggttttgtgaagaatctggctgttagtgctgtggttagc
tctgtgatgagggagtctttgcttgacttatttgtctcttgtggaatgaagaaactggat
gaagttcttttacaagagcttggtggtaaagacaagattttcttgaatggaaatttggtt
ggtatgagtgcatacccaggcgagtttgttacacatctaaggaatatgagacgtagcaag
caaatcgatccacaggtggaaatcaaaagggacaagcaacacaaagaagttcgtgtcttt
tctgatgcagggagacttctaagaccactccttatagttgagaatcttaaaaacatcact
aaaccgaaaggtggatcatactcatttggggaactgatggaccaaaatataattgagctg
attggtgttgaagaggaggaggatatccgatgtgcctgtggagttagggatctcttgtct
ggggacaaaaaagagggtcttttgtactacactcattgtgaacttgacccttccttcgtg
ctagggttgagttgtggtatcattccctttgccaaccacaatgctgctcggagggttttg
atgcaagctgaaaaactatcacaacaggctattggctactcttctacaaattctcagtat
agggctgataccctttttcatcaattgtactatccacagagacccctgtttaaaactgta
gtgtctgactgtcttggtaagaaaaaccataatagaccagagtttttcaatggccaaaat
gcaatagtttcagtcagtattcatcagggatttaaccaagaagactccctggtattgaat
agggcttctttagagcgtggcatgttccggacatttcatttcaagagctacaaagcacag
atagaaaacaaagaggtgaccagacgactcaaacacagggaaaaagttgaatttggaaaa
acccaaagcaagaaaggacgtgttgacagtctggatattgatggcttaccatatgttgga
gcaagtcttcagagtggcgacattgtcattgggaaagtctcggaatctggtgaagatcat
agtatgaagcttatgcatactgaaaaagggatggtggagaaggttgttctttcagctaat
gatgatgggaagaactctgcagttgttactctaagacaggctcgctcaccttgcgttgga
gacaagttcgccagtatgcatggccagaaaggagttgttggtctcttggattctcaggag
aacttcccgtttacttgccaaggaatagttccagatatcgtgataaatccacacggtttt
ccaactcgtcagactcctggtcagctgcttgaggctgcgttgggcaagggaattgccctt
ggtgggatgaccaaatacgcaacaccatttaccactccatctgtcgacgtgatcacggag
caattgcacaaggctgggttttcaaggtggggaggagagagtgttctgaatggtcataat
ggcgaaaggatgcagtccttggtcttcattggcccaaccttctatcagaggctgacccac
atgtctgaggacaaggtgaagttccgtaacactgggcctgttcacccgctcacgaggcag
ccagtggtggacaagaaacggttcggcggtgtcaagttcggggagatggagcgtgactgc
ctcctcgcccatggtgccacggccaacctccatgaacggctgttcacactcagtgacctc
tcacagatgcacatctgccagggttgcgagcgggtggccaacgtgatcatgaggcctgtc
gaagggggcaagacggtccgtggtccctactgcgggttctgcaagtcggtggagaacata
ctgcagatcaaggtcccttatggcgcgaagctgctctaccaggagctgttcagcatgggg
atctgcctcaagttcgagaccgaagccagttag

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