Lolium perenne (perennial ryegrass): 127327078
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Entry
127327078 CDS
T08650
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127327078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127327078
Spliceosome [BR:
lper03041
]
Common components
Common spliceosomal components
SR proteins
127327078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127327078
NCBI-ProteinID:
XP_051209823
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All DBs
Position
3:143415450..143421483
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AA seq
245 aa
AA seq
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MGRRNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD
AIYGRDGYTFDGYRLRVELAHGGRGQSYSHDPPRSFSSGRRGGVSRRSEYRVMVDGLPSS
ASWQDLKDHMRRAGDVCFSDVYREAGEIVGIVDYTNYDDMKYAIRKLDDTEFRNAFSRAY
IRVREYNARSRSRSLSVSYSRSRSYSRSLSRSRSPVSSASPGKSVSRSPSRSRNFSGSAS
PVRSD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggcgtaacagctgcaccatttatgtgggcaatctccctggggacatccgagag
agggaggttgaggatctcttttacaagtatggccgtatcgtggatattgacttgaagatt
cctccaagacctcctggttacgcttttgttgagtttgaggatccccgtgacgctgatgat
gcaatatatggtcgtgatgggtatacctttgatggctacaggttgcgggtggaattagct
catggtggaagaggtcaatcgtactcacacgatcccccaagaagctttagcagtggacgc
cgtggaggtgtttctaggcgctcggagtaccgcgttatggtggatggtttaccttcgtca
gcgtcatggcaagatctgaaggaccacatgcgacgggctggtgatgtctgtttttctgat
gtataccgggaggctggagaaattgttggaattgtggattatacaaactatgatgacatg
aaatacgcgattaggaagcttgatgatacagaattcagaaatgcattttcacgggcatat
atcagggtgagggagtataatgctagatcaagaagcagaagccttagcgtctcttactca
agaagtcgcagctatagcagatcgctgtcaagatcccgatccccagtttcttctgcctct
cctggaaaatctgtgagcagaagccctagcaggagcaggaacttctctggctctgcatct
cctgtgagatcagattga
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