KEGG   Lolium perenne (perennial ryegrass): 127327339
Entry
127327339         CDS       T08650                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1b
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
lper  Lolium perenne (perennial ryegrass)
Pathway
lper03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lper00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    127327339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lper04121]
    127327339
   03036 Chromosome and associated proteins [BR:lper03036]
    127327339
Enzymes [BR:lper01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127327339
Ubiquitin system [BR:lper04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127327339
Chromosome and associated proteins [BR:lper03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     127327339
    Noncanonical PRC1 (PRC1.1)
     127327339
    Noncanonical PRC1 (PRC1.3/1.5)
     127327339
    Noncanonical PRC1 (PRC1.6)
     127327339
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-UDP zf-C3HC4_4 zf-rbx1 zf-RING_6 zf-RING_4 zf-Nse zf-RING_11 ZNF512_C2HC
Other DBs
NCBI-GeneID: 127327339
NCBI-ProteinID: XP_051210076
LinkDB
Position
1:220415878..220420972
AA seq 493 aa
MPAQKRPHPSSAGAAPVQPHVQDQATGAEPNGNANALGTPNGAAPELAKEVRRERDDGDS
DAGEEQEQDQRDDEEGGGGNDDEDRDDDDDDSQSSQSDGADMDEFILVKLMDIRKEVQCP
ICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCKSRRSLRDDPNFDALILA
LYPDIDKYEEEELAFGEEEKTRNKKIQESIAETYRRQSEALVKKRSTAKAIATSRKTRGN
MRTKRRGRNSSPDIAPTDIDEEEEREENGNEGSKESSSVDDRSPEVKVKRARRWPVPRSS
PAKIIGSVESSYEENDDMGGARDILATSPLRGEMLAWGKNGTRSQTRHGSAGGSSGRMVK
GGRVAKLVDHLRNADEFDSKLNLYLVLAPLDGQSMPKLEKSYLSCQPTFCVRHLCQFVAL
QLSRQAKEVEIYFRKNSRDGSFAIEETGTDEAMLDRFDGLERLKEEKSLSELYPSFASGA
GDLELLYSLKTQG
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgcccgcgcaaaagcgcccgcacccgtcctccgctggcgccgccccggtccaaccccac
gtccaggaccaagctacaggcgcggaacccaacggcaacgccaacgccctagggacgccc
aacggagccgcccccgagctggccaaggaggtgcgccgcgagcgcgacgacggcgattcc
gatgcgggggaggagcaggagcaggaccagcgggacgacgaggaaggcggcggcggaaac
gacgacgaagaccgcgacgacgacgacgacgacagccagtcgtcgcagagcgacggcgcc
gacatggacgagttcatactagtgaaattaatggatatacggaaggaagtgcagtgccct
atatgcttaggcattatccgcaaaacaagaacggttatggagtgtttgcaccggttttgt
agggattgcattgataaatccatgcggcttggaaataatgaatgcccggcatgccgcact
cattgcaagagcagacgttccttgagggatgatcctaattttgacgctttaattttagct
ttatatccagatattgacaagtacgaggaagaggaacttgcttttggtgaggaggagaag
actcgcaacaaaaagattcaagaatccattgctgaaacataccgaagacagtcagaagca
cttgtgaagaaacgctccactgcaaaagcaatagctacatcaagaaagactcgggggaat
atgcggacaaagaggagaggacggaatagttctcctgatattgccccgactgacattgat
gaggaggaggagagagaagaaaatggcaatgagggcagcaaagaatcgtcttctgttgat
gaccgttcgccagaagtaaaggttaaaagagctcggagatggcctgtgccacgatcatcc
ccggctaagattattggcagtgtcgagagtagctacgaggagaatgatgatatgggaggt
gccagagatatcttggctacttctccgctgcgtggagagatgcttgcctggggcaaaaat
ggcacccgcagtcaaactcggcatggcagtgccggtggctccagtggaaggatggtcaag
ggtgggcgtgttgccaagttggtggatcatctccgtaatgctgatgagtttgatagtaag
ctcaacctgtatcttgttctggctccacttgatggacaaagcatgccgaaactggagaag
tcctacctcagttgccagccaacgttctgtgttcgccatctgtgccagttcgttgctctt
cagctgtcccggcaagccaaggaagtggagatttacttcaggaagaactccagagacgga
tcctttgcaatagaagagaccggtacagacgaagcaatgctggatcggttcgatggcctg
gaaaggttgaaggaagagaaatctctttcggagctttacccttcgttcgcctccggtgcc
ggggacctggagctgctgtactccctgaagacacaaggctag

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