Lolium perenne (perennial ryegrass): 127327340
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Entry
127327340 CDS
T08650
Name
(RefSeq) zinc finger CCCH domain-containing protein 36
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lper03000
]
127327340
Transcription factors [BR:
lper03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
127327340
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Torus
SRI
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
127327340
NCBI-ProteinID:
XP_051210077
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Position
1:complement(220257124..220285186)
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AA seq
628 aa
AA seq
DB search
MASASGPVGGLQKKEIADAEMEPPEEAAGRPVGLKRARSAAIGNGSCGFIGVTTAEKKPT
LQPHNNVKFLKKAANGNLLRPDIEATSKTGGLYLHDTHGSQKLPDSNALRFSSSSPVGDL
RSKTKTPICTFYAQGHCKRGKKCAFRHEREGPGFGNLRSEEEKAGSLAPVGTGKHRGSEE
GSEAQCLSNLKDPHFENFAASSKHGLYRTLIQSYGEDHRVVAHNSPTPKVSEESSCRTDD
LWTAKPTPPVNELVQIPIVQEKNHEPYFMGRHASLPSDSYLDGRGTLPRLHLDGGKLLSD
AAKASSLSDSHISGPYLEVHPVHPDYRYRPFDYLQRSSLASYSSNSTTGFRNPVHNSSDY
SLGSQPFRATAHLGMPSLHQLTPGIEKVGLHKDVIFDKGCGTSRPALLGSSSPQPGQLSP
IKDEPWITSVPFVPLVDFPGSTSPSYSQYDPLVDSMDLSKVKGINILKSSNISCSTSSQH
TTGNVVIDGDTNKSMNYDDKLARNMSAKGSNEFAGLVAPDRERSGLDGDTMVKASEREND
AAITEKTRDFRFHLAEHVKELLKPFWKEGNLNKDAHKLIVKKSVDKVLASVELHQVPATK
ELITDYITMAGTKIEKLVKAYVDKHRMK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcctccggccccgtcggcgggttgcagaagaaggagatcgcggatgcggag
atggagccgccggaggaggcggcggggcggccggtggggctgaagagggctaggagcgcg
gcaatcggcaacggctcttgcggttttattggagtgactactgctgagaagaaaccaaca
ctgcagcctcataacaatgtcaaatttctgaagaaagctgccaatggcaatcttctacgt
cctgatattgaagctacttctaaaacaggaggtctttatctgcatgatacgcatggatca
cagaaactgccagattccaatgctttgagatttagtagctcatctcctgttggagacctg
aggagcaaaaccaaaacccctatatgtaccttttacgctcaaggccattgcaagagagga
aagaagtgcgcttttcgtcatgaaagagagggtcctggttttggtaacctgcggagtgaa
gaagaaaaggctggttcacttgcaccagttggtactggaaaacatagagggtctgaagaa
ggatctgaagcacaatgtttatccaatttgaaagatccacacttcgagaactttgctgct
tcgtcgaaacatgggctatataggaccctcattcagtcttatggcgaagatcatagggtg
gtggcacataactcgccgacccccaaggtttcagaggagagttcttgcagaactgatgat
ttatggactgcaaagcctacccctcctgtaaatgagctggtgcagatcccaatagttcaa
gagaagaatcatgaaccttacttcatgggacgccatgctagtttgccttctgatagctac
ttggatggtaggggaaccttacccagattgcatttagatggaggaaagctgctgtcagat
gctgccaaagcaagcagcctaagtgattctcatatatcaggaccttaccttgaagtgcac
ccggtacatcctgattatcggtatcgaccgtttgactatctccaaaggtcaagccttgcc
tcatacagttcaaatagtacaacagggttcagaaatccggtccacaatagctctgattat
tccttgggtagtcaacctttccgagcaactgctcacctaggaatgccgtccctccatcag
ttaacacctggtatcgagaaggttggtctccataaagatgttatatttgacaagggctgt
ggtacatctaggcctgctttacttggaagcagttcacctcaacctgggcaactttcccca
atcaaggacgagccttggataacttcagtgccttttgtacctcttgttgattttcctggc
agcacatcaccttcatatagtcaatatgacccgcttgttgacagtatggacctttccaaa
gttaaaggtattaatattctcaagtcctcgaacatatcttgcagcacttcaagtcagcac
actactgggaatgttgttatagatggagataccaacaagtcaatgaattacgatgacaaa
ttggcaaggaatatgtcagccaaagggtcaaatgagtttgcaggccttgttgcacctgat
agggaacgctctggtctggatggtgatactatggtgaaagcttctgaaagagaaaatgat
gcagcaattactgagaaaacaagagattttcgttttcatttggcagaacatgtgaaggag
ttgctgaaaccattttggaaagaaggcaatctgaataaagatgctcataaactgatagtg
aaaaaatccgtcgataaagttcttgcttcagttgagctgcatcaagtaccagctactaaa
gaattgataactgattatataaccatggctggaacaaagattgaaaaacttgtgaaggca
tatgttgataagcatcgtatgaaatga
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