Lolium perenne (perennial ryegrass): 127327373
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Entry
127327373 CDS
T08650
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127327373
03036 Chromosome and associated proteins [BR:
lper03036
]
127327373
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127327373
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
127327373
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HHH_9
HTH_44
SH2
Tex_central_region
Tex_N
HHH_3
Motif
Other DBs
NCBI-GeneID:
127327373
NCBI-ProteinID:
XP_051210103
LinkDB
All DBs
Position
1:218327201..218335657
Genome browser
AA seq
1638 aa
AA seq
DB search
MGLGRTVVSDDEEEDFIEAEEEEDEPRPSRRGRDDVDEQDDDDDEEDEEEEGQNEYEKDG
FIVDDADEDEEEEEEEARASDDERRKKKKKKKRESEDFELDEDDYMLLQDNNITGIHRPK
PAGNKFKRLKKAGRESEMGEHSGFSDDNASGKRRTAEEKVQYSLFGNEEPFEEDIVEEDQ
QADEDDVAEDDMDDEMADFIVDEEEIDGNGQVVKRKKVKRKPLRQAAGVSSSALQEAHDI
FGDVDELLALRKQELERDAINSGEMRGNRLEDEFEPFILAEKYMTPKDEQIKENDVPERI
QLSEELTGNPPGLEENSRREEESVWIHNQLTGDGFLSFFGNERANKEIEQTDIVNVLYML
HVNKFEIPFIAMYRKESCPSLLDHDVHEPEYDDGKREMTWHKLLWAVQTLDRKWLLLQKR
KLALQIYYEKRFEEEKRRIDDVTRQTLNRQLYYSIIEALNDAKSEKEVEDVDAKFNLHFP
PGEVEELGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGHHLTLTSVPEAGELDSGK
DSPEDVATNFTCAMFETPQDVLRGARHMAAVEIGCEPIVKKHIRGIFMNKAVVTTKPTPE
GNLIIDPYHQLSGVKWLREKPLNKFVDAQWLLIQKAEEEKLLKVTISLPEDAKKELMSEA
RENYLSDCVSKSAQLWDEQRKMILDDAFLNFLLPSMEKEARALLTAKAKSCLHMEYGQQF
WNKVSVAPWKKKDSDKKDADLDLDDESELRVMACCWGPGKPATTFVMLDSSGELVDVLYA
GSLSIRSQGVAEQQRKKNDQQRVLKFMTDHSPQVVCVGASNLNCRQLKDDIYEVIFKIVE
DHPRDVNPQMENFSIVYGDESVPRLYENSRISSDQLPGQSAIVKRAVALGRYLQNPLAMV
ATLCGPGKEILSWKLHPLDQFLTPDEKYEVVEQVMVDATNQIGFDVNLAASHEWHFSTLQ
FVAGLGPRKASALQKELVREGSIFSRKELVKPLGRKVFMNASGFLRVRRSGAAAGSAQII
DLLEDTRIHPESYALAKNLAKDVQSEDADEVNEMDDDEQEMAIEHVREKPKKLKSLKIDE
YMKSIPEESRKRETLYDIREELLRGFSDWRIQYAEPSPDEEFWLLSGETEDNITDGRIVQ
VTVRNIQENRIMCTFDSGLKAIVMGDNYSDEGYDPESLQLHEGDVLTGKIKNVNKNRFIV
YLTCKISELKRRPFSRNNHDPYYHEEDIIPSQNDKIRKQKELAKKHYKPRMIVHPHFQNF
TAEEAMQFLGDKEPGEKVIRPSSRGPSFLTLTLKIFDGVFAHKEITESGKDHKDITSLLR
LGKTLTIDNETFEDLDEVIDRYVDPLVGHLKSMLSYRKFRKGLKGEVDEMLRAEKTENPM
RIVYCFGISHEHPGTFILSYIRSTNPHHEYVGLYPKGFRFRKKDFDSIDRLVSYFQKHID
KPPPESGMSMRNVAAMVPMKNSDWGSGGANDGWRGDGDNGRDRPFSGRSGGRFDSRDSSG
GRGRGRGRGRGRGNFGSDDGGGGGGNSGGWTDNIGSGGGAWGSGGGSGSGDPGWGGGGGD
NNRGGGGDGGWGAPAAASDAGGGGWGAPAAASDAGGGWGAAAPAGSGAGDDSGWGSAKKA
VPAQDGGSGGWGTGGGGW
NT seq
4917 nt
NT seq
+upstream
nt +downstream
nt
atggggttgggacgcacggtggtgtccgacgacgaagaagaggactttatcgaggctgag
gaggaggaggatgaaccgcggccgtcacggaggggcagggatgacgtcgacgagcaggac
gacgacgatgatgaggaggacgaggaagaggagggacagaatgaatatgagaaggatggc
ttcatcgttgatgatgccgatgaggatgaagaggaggaggaagaggaagcaagagcaagt
gatgatgaaagacgcaagaagaaaaagaaaaagaagagggaatcagaggattttgagctt
gatgaggatgactacatgttgctccaggataataacatcactggcatccatcgtccaaag
cctgctggaaacaaatttaagcggttgaagaaggcaggaagggaatccgaaatgggtgag
cattctggcttctctgatgacaatgcatcgggtaaaaggcgtaccgccgaggagaaagtt
cagtattccttgtttggaaatgaagagccctttgaggaggatattgtcgaggaggatcag
caggcagatgaagatgatgttgctgaagatgacatggatgatgaaatggctgatttcatc
gtggacgaagaggaaattgatgggaatggccaagttgtgaaaaggaagaaggttaaaaga
aagcctcttagacaagctgcaggtgtttcatcatctgctttgcaagaggcccatgatata
tttggggatgttgatgagcttttagcactaagaaagcaagagcttgagagggatgctatt
aattctggcgagatgagaggaaacaggcttgaagatgagtttgagccatttattcttgca
gagaagtatatgacacccaaggatgagcaaatcaaagaaaatgatgtacctgagaggatc
cagctgtctgaggaattaactggtaatcctccgggtctagaggagaactcaaggagggag
gaagagagtgtatggatacacaaccagctcactggtgatggatttctctccttttttggc
aatgagcgtgcgaacaaggagattgaacagactgacattgtgaatgtcttgtatatgcta
catgtcaacaaatttgaaatcccattcattgcaatgtataggaaggaaagctgcccgagt
ctgttggaccatgatgtccatgaaccagagtatgacgatggcaaacgtgaaatgacgtgg
cataagctgctttgggctgttcagaccttagacaggaagtggctacttctgcagaagcgc
aagcttgctttgcagatttattatgaaaaacgattcgaggaagagaaacgaagaatagat
gatgttacaaggcagacactcaatcggcaactttattactctattattgaagcactaaat
gatgcaaaatctgagaaagaggtggaagatgtggacgcaaagttcaatctacattttcct
cccggcgaagttgaagagttaggtcaatttaagcgaccgaaaaggaaatccctatacagt
atttgtcacaaggcagggctgtgggaggttgctaaccaatttggccggagtgctgagcaa
ttaggccaccatctaactttaacgagcgtacctgaagcgggcgagcttgacagcgggaaa
gattctcctgaagatgttgctacaaatttcacatgtgcaatgtttgaaactccacaagat
gttcttaggggtgccagacacatggcagctgttgagatcggctgtgagcctattgtaaaa
aagcatatcaggggtatcttcatgaacaaggctgttgtcacaacaaagcccacacctgag
ggcaatttgatcatagatccctaccaccaactatcaggtgttaaatggctgcgagagaaa
ccactaaacaagtttgtagatgcacagtggcttcttattcagaaagcagaggaagaaaag
ctcctcaaggttaccatatcattaccagaggatgcaaagaaagagctcatgtctgaggct
cgtgagaattatctaagtgactgtgtcagcaagtctgcacaattgtgggatgagcaacgg
aagatgatactggatgatgccttcctcaattttcttcttccatcaatggaaaaggaagct
cgagcgctgttgacagcaaaagccaaaagttgtctccatatggaatacggacagcagttc
tggaacaaggtttctgttgctccatggaagaagaaggattctgacaagaaggatgctgac
cttgatctggatgatgaatcagagctgagagttatggcctgctgctggggtcctgggaag
ccagcaaccacgtttgtaatgttagactcatcaggagaattggtggatgttttgtatgct
ggttctctcagtattagatctcaaggcgttgctgagcagcagcggaagaagaacgatcag
cagagggttttgaagttcatgactgaccattcaccgcaagttgtatgtgtaggagcatca
aatttgaattgcagacaactcaaggatgatatctatgaggttatatttaaaatcgttgaa
gatcatccaagagatgtgaacccgcaaatggaaaattttagcattgtctatggtgatgaa
tccgtgcctcggttgtacgagaactctcgcatatcttcagatcagctgcctggccagtca
gctatcgtgaagcgtgcggtggcgcttggtcggtacttgcagaatcctttggcgatggtt
gcaacactctgtggacctgggaaagagatactgtcatggaaactccacccccttgatcag
ttccttactccggatgagaagtatgaagttgttgagcaagtaatggtcgatgctacaaat
cagattggctttgatgttaatcttgctgctagtcacgagtggcatttttccactttacaa
tttgttgctggtctggggccacgtaaagcttcagcgttgcagaaagaattggtgagagag
ggatccatctttagtcgcaaggagctggtaaaacctcttggaaggaaggtattcatgaat
gcgtctgggtttttacgtgtccgacgaagtggtgcagctgcaggcagtgctcaaatcatt
gatctgcttgaggatacacggatccatcctgaatcatatgcgttagcaaagaatttggcc
aaggatgtccagtccgaggatgcagatgaagtgaatgagatggatgatgatgagcaagag
atggcaattgagcatgtaagagaaaagccaaaaaaacttaagagtcttaagatcgatgaa
tacatgaagagtattccagaggagtctcgtaaaagggaaacattgtatgacattagggaa
gagctactgcgtggcttttctgactggaggatccaatatgctgagccaagtccagatgag
gaattctggttgctttctggtgaaactgaggataacataacagatggaaggattgttcaa
gtaactgtccgtaacatacaagagaaccgaataatgtgcacatttgattctggtttgaaa
gccatagttatgggagacaattattctgatgaaggctatgacccagaatcacttcagttg
catgaaggtgacgtattaactggcaaaattaagaatgtgaacaaaaataggttcatagtt
tacctaacatgcaagatctctgaattgaagagaaggcctttctccagaaataatcatgat
ccttactatcatgaagaagatatcattccaagccagaatgataagatccggaaacagaag
gaacttgcaaagaaacattacaagcctcggatgattgttcatcctcactttcagaacttc
acagctgaagaagcaatgcagttcttgggagacaaagagcctggtgagaaggtcattcgg
cctagttctaggggcccatcatttctaacacttaccttgaagatattcgatggtgtcttc
gcacataaggagataactgaaagcggcaaggatcataaagatattacaagtttacttcgc
cttggaaagacgctgaccattgataatgaaacttttgaagatcttgacgaggtaatagac
agatatgtggatccattggtaggccacctgaaaagcatgctctcctatcgtaaattcagg
aaggggttaaaaggagaggttgatgaaatgttaagggcagagaagacagagaatcctatg
agaatagtctattgttttggcatatcccatgaacatccaggcacctttatattatcctac
attaggagcacaaacccacatcatgagtatgtagggttatacccaaagggcttcagattc
cggaagaaggattttgacagcatcgatcgccttgtgtcatatttccagaaacacattgac
aaaccaccaccggaatctggcatgtcaatgcgaaatgttgctgcaatggttcctatgaag
aattcagattggggttctggtggtgctaatgatgggtggaggggagatggtgacaatggt
agggacagacctttctctggaagatcaggaggtaggtttgattcaagggacagctctggt
ggccgtggtcgtgggcgcgggcgtgggcgtgggcgaggtaacttcggcagcgatgatggt
ggtggtggcggcggcaacagtgggggttggactgataacatcggcagtggtggaggtgca
tggggctctggaggaggatctggaagtggagatcccggatggggcggcggcggtggtgac
aataaccgtggcggcggtggagatggaggctggggtgcacctgcagctgcctctgacgct
ggtggtggaggctggggagcacctgccgctgcctctgatgctggtggaggttggggagca
gctgctcctgctggctctggtgctggtgatgactcgggatggggcagcgccaaaaaggcg
gttccagcacaagatggcggaagtggtggttggggtaccggtggtgggggctggtga
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