Lolium perenne (perennial ryegrass): 127327859
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Entry
127327859 CDS
T08650
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127327859
Transcription machinery [BR:
lper03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
127327859
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
127327859
NCBI-ProteinID:
XP_051210627
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Position
1:265603770..265606716
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AA seq
572 aa
AA seq
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MGLRMVRGPCCCSPSPSSSSSSVWPWMLQAQLPRHPHPPLSGRPACSESLRVLALHLLLN
RHANLNRRPGDTVRTAASSSGLLQITENKTSSLPKMKVDAERTALDDALDRNTQFGRIYE
DMSSWMDVAYTSSNSLEYNLLMQNIHVLESSLAGQDLVTLERDILVHMEQLGALKWFNAT
RSRATVTQTSYEPDFALAWNVTESGPVTSPLEEQSDDQLVIRSGKSQERKLKRIRASEKG
SGVCVRALPRKSKKSRKSSSSQFIAEWKNYPGRRRSIVREQSELLVTIKECANLEKIREN
MLKEGQVVTYDRWAKAAGVDEAVLKSRLQAGYCCRERLLVTTEWLVKYIARSYTGIGTAF
EDLLQAGKMGVLDGAERFDSQKGCKFSTYVKYWIRKAMLALLAENSGVIQLPARMESIIR
KVKEAKRAIRSSTGRNPIDDEIATFVGVSLANVRLAKKYSRRVVSLYTEVGTGQNAKFWE
VTPDTSLEDPEEVIFRRQLRERLLLVLGTLPVREGHVLKLRHGLEDGRCMSLEQIGGIYH
VSKEWIRKIEKSAMSKLRNEDVHHELKDFCGF
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcgcatggtgcgcgggccttgctgctgctcgccgtccccgtcctcctcctcc
tcctccgtctggccatggatgctgcaggcccagctccccaggcacccccatcccccattg
agtggaaggccagcttgctctgaatccctgagagttctggccttgcatctgttgctcaat
cggcatgcgaatcttaaccggcgcccgggtgacaccgtcagaactgctgcgtcttcatct
ggtttgcttcagataacagagaacaagacaagcagcttgccaaaaatgaaggtggatgca
gaaagaacagcccttgatgatgctcttgaccgaaacacgcagtttggcaggatttatgag
gacatgtcttcctggatggatgtggcttacacaagcagcaacagtttggagtacaacctg
ttgatgcaaaacatccatgtcttggagagtagtttggctggccaagatttggtaactctg
gaaagagacatccttgtacatatggaacaacttggagctctgaaatggttcaacgcgacc
aggtccagggctactgttacacaaacctcatatgaaccagattttgcacttgcttggaat
gttaccgaatccggtcccgtgactagtcctctcgaggagcaaagcgatgatcagctggtc
attcggagcgggaaaagccaggagaggaaattgaagagaattagagcgtctgagaaaggt
tccggggtttgtgtaagggcgttgccacgaaaatccaaaaaatcacgcaagtccagtagt
agtcaatttatagctgagtggaaaaactatccgggccgacgaaggagcatcgtccgagaa
caatcggagttgctggtgaccatcaaggaatgtgcaaaccttgagaagatcagagaaaac
atgctgaaggaaggacaagtggtcacctacgataggtgggctaaggcagctggagttgat
gaagcagttctgaagagtagactgcaagcaggttactgctgcagagagaggctattggta
accaccgagtggcttgtcaagtacattgcaagatcatacaccggaattggaacagctttt
gaagatcttctccaggctgggaaaatgggtgtgcttgatggcgccgagaggtttgacagc
cagaaagggtgcaagttctcaacttatgtgaagtactggataaggaaagcgatgctagcg
ctccttgctgaaaattctggagtaatccagctgcctgcaaggatggagagtatcatccga
aaagtgaaggaagctaagcgggcaatacggtccagcacagggaggaacccaatcgacgac
gagattgcaacctttgttggcgtgtcacttgccaatgttagattggcaaagaagtactct
cgtcgtgttgtttcactctacacggaggtcggaaccggacagaatgccaagttttgggag
gtgactccagacacatcattggaagatccagaagaagtcatcttccggaggcagctgcgg
gagaggctgcttcttgttctgggcacgctcccagtgagagaggggcacgtgctgaagctg
cgacatggcctcgaggatggcaggtgcatgtctctagagcagatcggaggcatctaccat
gtgtctaaggagtggatcaggaaaatcgagaagtctgccatgtccaagctcaggaacgag
gatgtgcatcatgagctcaaggacttctgtggattctag
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