Lolium perenne (perennial ryegrass): 127327941
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Entry
127327941 CDS
T08650
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127327941
09123 Folding, sorting and degradation
03018 RNA degradation
127327941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127327941
03041 Spliceosome [BR:
lper03041
]
127327941
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127327941
mRNA degradation factors
5'-3' decay
Lsm complex
127327941
Spliceosome [BR:
lper03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127327941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
127327941
NCBI-ProteinID:
XP_051210729
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Position
1:complement(270471526..270473074)
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AA seq
99 aa
AA seq
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MASVGATLESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVL
GLYIIRGDNISVVGEVDEDLDAALDMSKLRAQPLKPVIH
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtcggcgcgacgctcgagtccctcgtcgaccaggtgatctccgtcatcacc
aacgacggacgcaacatcgtggggacgctgagggggttcgaccaggccacaaacatcatc
cttgacgagtcacacgagagagtctactccacaaaggagggagtacagcagcttgttctt
gggctctacattatcagaggcgacaacataagcgtggtgggcgaggtggacgaggatctg
gacgcggccctggacatgtccaagctgagagcgcagccgctcaagccggtgatccactga
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