Lolium perenne (perennial ryegrass): 127330218
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Entry
127330218 CDS
T08650
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127330218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127330218
03009 Ribosome biogenesis [BR:
lper03009
]
127330218
04131 Membrane trafficking [BR:
lper04131
]
127330218
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lper04147
]
127330218
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127330218
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
127330218
Membrane trafficking [BR:
lper04131
]
SNARE
SNARE associated proteins
Others
127330218
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127330218
Exosome [BR:
lper04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127330218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_33
AAA_14
AAA_22
TIP49
NPHP3_N
CDC48_2
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
Parvo_NS1
AAA_18
ABC_tran
ATPase_2
IstB_IS21
AAA_7
Viral_helicase1
AAA_lid_PRS2_C
NB-ARC
AAA_24
TsaE
Vps4_C
NACHT
Zeta_toxin
DUF815
ResIII
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
127330218
NCBI-ProteinID:
XP_071681239
LinkDB
All DBs
Position
2:complement(111873353..111875762)
Genome browser
AA seq
711 aa
AA seq
DB search
MMSAAPSKKAANRLVVEEPTDDDNSMCKLHPATMERLSIFTGDVVLLKGKRRRSTVCIAI
TDDTCEEHKMKINKVVRSNLRVRVADVVSVHQCHDARHGTRVHVLPVDDTVEGITGNLFE
SYLKPYFLDAYRPVRKGDLFLVRGGMRSVEFKVMDIDQGEDLEYCIVAADTEILCEGEPL
FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKA
FEEAEKNAPSIIFIDEIDSIAPNREKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNR
PNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLDVDVNLEVVAKDTHGYVGA
DLAALCTEAALQCIREKMDVIDLEDDTIDAEILNSMAVTNDHLKTALVGTNPSALRETVV
EVPNVSWNDIGGLDGVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK
AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIAMQRGGS
VGDASGAADRVLNQLIYIPLPDEASRHQIFKACLRKSPVAKDVDLSALARFTTGFSGADI
TEICQRACKYAIREDIEKDIEKQKLEKDSMEVDCGQEAEEVAEIKAAHFEESMKYARRSV
SDGDIRKYQAFAQTLQQSRGFGTEFRFPVQPQAAEAATNTFAAADEDDLYN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggccgcgccgtcgaagaaggccgcgaaccggctggtggtggaggagccgacc
gacgacgacaactccatgtgcaagctccacccggccaccatggagaggctctcgatattc
actggcgacgtcgtgctgctcaagggcaagcgccgccgcagcacggtctgcatcgccatc
accgacgacacctgcgaggagcacaagatgaagatcaacaaggtggtccgctccaacctg
cgcgtccgcgtcgccgacgtcgtgtccgtgcaccagtgccacgacgccaggcacgggacg
cgcgtgcacgtcctgccggtggacgacaccgtcgagggcatcaccggcaacctcttcgaa
tcgtacctcaagccctacttcctggacgcgtaccgcccggtccgcaagggcgacctcttc
ctcgtgcgcggcggcatgcggagcgtcgagttcaaggtcatggacatcgatcaaggcgag
gacctcgagtactgcattgtggctgccgacacggagatcttgtgtgagggagagcccctc
ttcaagtccatcggcgtcaagcctcccaagggcatccttctctacggccctccgggatcc
ggcaagaccctcatcgcccgcgccgtggccaacgagaccggggccttcttcttctgcatc
aacggccccgagatcatgtccaaaatggccggagagagcgagagcaacctcaggaaggcc
ttcgaggaggcggagaagaatgcgccctccatcatcttcattgatgagattgactccatc
gctcccaacagggagaagactcacggcgaggttgagaggcgcattgtctcccagctgctc
accttgatggacggcatgaaggcccgcgcgcacgtcattgttatgggcgccaccaaccgg
cccaacagcatcgaccctgctctcaggcgctttggtaggttcgatcgcgagatcgacatc
ggcgtaccggacgaggtcggacgcctcgaggtgctccgcatccacaccaagaacatgaag
cttgatgtggacgtcaacctcgaggtggttgccaaggatacacacggctacgtcggcgcc
gacttggccgcgctctgcacggaggcggccctgcaatgcatcagggagaagatggacgtg
atcgacctggaggacgacaccatcgatgctgaaatcttgaactccatggccgttaccaat
gaccaccttaagacggctctcgtcggcacgaatccatctgcgcttcgggagaccgtcgtc
gaggtgcccaacgtcagctggaacgacatcggcggcctcgacggcgtcaagagggagctg
caagagaccgtccagtacccggtcgagcatccggagaagtttgagaagtttggcatgtcg
ccttccaagggtgtcctcttctacgggccaccggggtgcggcaagaccttgctggccaag
gcgatcgctaatgaatgccaggccaacttcatcagcatcaagggacccgagcttcttacg
atgtggtttggcgagagcgaggccaacgtgcgggagatctttgacaaggcgcgtcaatct
gcaccgtgcgtcctgttcttcgacgagcttgattccatcgctatgcagaggggcggcagc
gtgggcgacgccagcggcgcggcggacagggtcctgaaccagctcatctacatccccttg
cccgacgaggcctcaaggcaccagatcttcaaggcctgcctcaggaagtctccagtggcc
aaggacgtcgacctcagcgcgctcgcgaggttcacgaccggtttcagtggtgccgacatc
acggagatctgccaaagggcatgcaagtacgccatcagggaggatatagagaaggacatt
gagaaacagaagctggaaaaagatagcatggaggtagactgcgggcaggaagcagaggag
gtggctgagatcaaggcggctcacttcgaggagtcgatgaagtacgcgaggaggagcgtg
agcgacggcgacatcaggaagtatcaggcctttgctcagacgctgcagcagtccagaggg
ttcggcaccgagttccgcttcccggtgcagccgcaggcggcagaagctgctaccaacacc
ttcgcggcagctgatgaagatgatttgtacaattga
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