Lolium perenne (perennial ryegrass): 127331234
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Entry
127331234 CDS
T08650
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127331234
Enzymes [BR:
lper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127331234
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127331234
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
PHD
zf-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
127331234
NCBI-ProteinID:
XP_051213270
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All DBs
Position
2:13651658..13654989
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AA seq
274 aa
AA seq
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MSHRFLLLLLAATATAVRPCAAVIRLGATSFLDAPARFGPRVTGDGICGSLRAADPANAC
APIKNSAGSGPGMAFVLIERGNCSFEGKVREAQLAGFDAAVVYDDEEKSSLYSMVGDPED
IHIPAVFVSKMAGETLKKFARGEDGECCINSSMDETAGTVLVMSFVSLVVIISVLASFLF
ARNCRLLRHGVDNRPPYIKKHVVEKLPCSVYKAQCSSGENFEEACAICLEDYDNGDMLRL
LPCKHEFHVACIDPWLTKWGTFCPVCKLEVITGE
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccgcttcctgctcctgctcctcgccgccaccgccaccgccgtccgcccctgc
gcggccgtcatccgtctgggcgccacctctttcctcgacgcccccgcgcgcttcgggccc
cgggtgaccggcgacgggatatgcgggtcgctgcgcgccgcggaccccgccaacgcctgc
gcgcccatcaagaacagcgccggttccggccccgggatggcgttcgtgctgatcgagcgg
gggaactgcagcttcgaggggaaggtgcgggaggcgcagctcgcggggttcgacgccgcc
gtcgtgtacgacgacgaggagaagtccagcctctactccatggttggtgatcctgaagac
atacacatccctgcggtatttgtatccaaaatggctggggagactttaaagaagtttgct
agaggtgaagatggtgaatgctgcataaactcatcgatggatgagactgcagggacggtg
ttggtaatgtcatttgtatcacttgtcgtgatcatatcagttttggcttcgtttcttttc
gctcggaactgccgacttctacgccatggagttgataaccgtccaccttacatcaagaag
cacgtagtagaaaagctcccttgctctgtatataaagctcagtgttcaagtggtgaaaat
ttcgaagaagcttgtgccatttgtttagaagactatgataatggtgacatgcttagactt
ctcccatgcaaacatgaatttcacgtggcgtgcattgatccctggctgacaaaatggggt
acattttgccccgtatgcaaacttgaagtgatcacaggtgaataa
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