Lolium perenne (perennial ryegrass): 127331316
Help
Entry
127331316 CDS
T08650
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127331316
Enzymes [BR:
lper01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
127331316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
127331316
NCBI-ProteinID:
XP_051213393
LinkDB
All DBs
Position
2:complement(16804390..16806275)
Genome browser
AA seq
376 aa
AA seq
DB search
MGASSFSRLCCCWISCNSASRHPPPPPAAAAAYLPCPHMEPQPEPHRPSQPRLPYADADR
TLRALAAGAEGFGRHAVGGLHGALYHVTSLQDDGHGTLREACRAKEPLWVVFEVSGTIHL
QTYLRVSSHKTIDGRGQRVKLTGKGLQLKDCHHVIVCNLEFEGGRGHDVDGIQIKPNSTN
IWIDRCSLADYDDGLIDITRQSTDITVSRCHFARHDKTMLIGADPTHVGDRCIRVTIHHC
FFDGTRQRHPRLRFGKVHLYNNYTRNWGIYAVCASVEAQIVSQCNIYEGGEKKTVFKYMP
EKAADREETAAGSIRSEGDAFLHGALPCLVDGPGVESVFRPEDYYDKWTMEVASPALKEV
IQLCAGWQPVPRPPDC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcctcctctttctcccgcctctgctgctgctggatctcctgcaactccgcctcc
cgccatccccctccccctcctgccgccgccgcagcctacctcccctgcccccacatggag
ccgcagccggagccccaccgcccctctcagccgaggctgccgtacgccgacgccgaccgc
accctccgcgcgctcgccgccggcgccgagggcttcggccgccacgccgtcggcggcctc
cacggcgccctctaccacgtcacctccctccaagatgacgggcacgggacgctccgggag
gcgtgccgcgccaaggagccgctgtgggtcgtcttcgaggtctccggcaccatccacctc
cagacctacctccgggtctcctcccacaagaccatcgacggccgcgggcagcgcgtgaag
ctcaccggcaagggcctccagctcaaggactgccaccacgtcatcgtctgcaacctcgag
ttcgagggcggccgcggccacgacgtcgacggcatccagatcaagcccaactccaccaac
atctggatcgaccgctgctcactcgccgactacgacgacgggctcatcgacatcacgagg
cagagcaccgacatcaccgtctcaagatgccacttcgcaaggcatgacaagacgatgctg
atcggcgcagaccccacgcacgtcggcgacagatgcatcagggtcaccatccaccactgc
ttcttcgacggcacgcggcagaggcacccgcgcctgcgcttcggcaaagtccacctctac
aacaactacaccaggaactggggcatttacgctgtttgcgctagcgtcgaagctcagatt
gtgtctcagtgtaacatatacgaagggggggagaagaagacggtcttcaaatacatgcca
gagaaggctgctgacagggaagaaacagcggctgggtcgatcaggtcggaaggcgacgcg
tttcttcacggggcgctgccgtgcctggtcgacggcccaggcgtcgagagcgtcttcagg
ccggaggattactacgacaagtggaccatggaggtggcgtcgccggctctcaaggaggtt
attcagctctgcgctgggtggcaacctgtgcccagaccaccagactgctaa
DBGET
integrated database retrieval system
