Lolium perenne (perennial ryegrass): 127331373
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Entry
127331373 CDS
T08650
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127331373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lper03400
]
127331373
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
127331373
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
DEAD
DUF7226
Motif
Other DBs
NCBI-GeneID:
127331373
NCBI-ProteinID:
XP_051213467
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Position
2:complement(18734294..18740430)
Genome browser
AA seq
1331 aa
AA seq
DB search
MPKEPRGRPSHPIDETPFEALYDGSWHGVKCIRVRDGGLFVKFVYSGSTVEHNVSGDHLR
MRSRKATCFDCLHVLKPGVSVSVLSPNALQILPCHDDARLVAIKRNHNADQCLCKFAVML
YKNQCPGNTEKGKMISDRKEEVVMTLRNIFLLQKLRPKELLEESIQWSCTVDCLSHNRSK
LLSGRFSSEIAHLIVLSTLRGMEFSIKLVEGKIIYRSIKGDKARYSLDSMTVPPGFGNSM
DIISFQPHDETLRPITKNVPLTHPKKDNLTEDTSFVLNTELAIPLEYMRLDGLIDAFCAN
KHNPITVKTELDVLSDVFSYEQLDMRRSKRLKTQPEHFISYDAPNFDRDKWKRRGASSTK
HDKLQRASYQDLSVKVESSLEEVPVNITPNQAAAGAFVTKEDSSSTKRQRMSTRTPVKEK
SISEEAKAKSTTQEMASYRYSSVEVDSSCEEVPANITPHQAGACTFLVKEKPSSTKEQYK
STRRTPVKKNPSSDVVKEKSTIQETALDSPIPRTPVKNKEKNHRPPMSFQRNSFTLSCSL
NGNSEPAFCQKSGRKRKERMSEREYKQMINQCIGNIQSEMERDFEFPLDVPVMNYHQGAY
QEEDFTWPPSADSPDEKDELDDLDDLWKEMDYSLTTVALLEQKQGPDSEAVHESTAGLGK
NGEIPCHHDCILDEEHGLVCRLCNVVCTEAKDIFPEMVNGNDYNKKRPGCSNFYHDEHVL
DPSLFAILGPELSELRGSVNLWSLIPDLEPKLLPHQRKAFEFIWKNLAGSLQLEEMNNPT
ASTGGCVVAHTPGSGKTLLLISFLVSYLKVHPRSRPLVLTPKSAIHTWRREFEKWGISLP
LHVLHHADRSGKPMGDIDPRLQAMLSNFRQSSWKNMRLVDCMDKLCKWHESPSILLMTYS
SFLGMTREDTRMSQRAFMAQVLINNPGLLILDEGHNPRSNKSKLRRVLMKVKTEYRILLS
GTIFQNNFEEYFNTLSLARPRFVNDVMTALVPERKKETSSRRAKHIEAVTRRIFVERVGQ
KMESSDNWDRVDGINLLNELTCGFIDSFEGSKLSSLPGIHAYTLFMKPTDIQKEILSKIT
MATSCGGRYLLEVEHLITICSIHPWLMKNTKCASSYFTPAEIDKVDKYKRDLAAGCKAKF
VIDLLHKSSYRGERVLIFCHNVSPINFLVKLIECVFGWRLGEEVLVLQGNQELPVRSDVM
DKFNGDIEGKRKVLIASTTACAEGISLTGASRLVMLDSEWNHSKTRQAIARAFRPGQQRT
VYVYLLVASGTWEEEKYSSNRRKAWVAKMVFHGRYFVDPLQNAVTAIDDSVLKELADEDK
TKTFHKIVKQD
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggaacctagaggccgccctagccatccgatcgatgaaactccatttgaggca
ctttatgatggctcatggcatggagttaagtgtataagggtcagggatggcggtctcttc
gttaagttcgtctactctggatccacagtggagcataatgttagcggggatcatctgcgc
atgcgatccagaaaggcgacatgcttcgattgcttgcatgttctcaagccaggtgttagt
gtctctgtactatcacctaatgccctccaaatattaccctgtcatgatgatgcaaggctt
gtcgcaatcaagagaaatcataacgcagatcagtgtctctgcaagtttgctgttatgctc
tacaagaatcaatgccctggcaacactgaaaaaggaaaaatgatatctgatagaaaagag
gaggtggtgatgaccctaagaaatatcttcctcttgcaaaaactccggccgaaggagctc
ctggaggaaagcatacaatggagttgtacggtggactgcctctctcacaatagaagcaag
ctcttaagtggtaggttctcttcagaaattgcacatctcatagtactgtctactctgagg
ggaatggagttcagcatcaagctggtagagggtaagatcatttatcgtagcatcaaagga
gacaaagcacgatacagtctcgattccatgaccgtccctccaggatttggcaacagcatg
gatataatttcattccaaccgcatgatgagactttacgcccaattaccaaaaatgtccct
ctcactcatccaaagaaggacaatctcacagaagacacgagttttgttttgaatactgaa
ttggctattccattagaatacatgagattggatggtctaatcgatgctttctgtgcaaac
aagcacaatccaatcactgtgaagactgaattggatgttctatctgatgttttctcgtat
gagcaactggacatgaggcgctcaaagcgtctcaaaactcaaccggagcactttatcagt
tatgatgcacctaacttcgatcgtgacaagtggaagaggcgtggtgcatcatccaccaag
catgataaacttcaaagagcttcatatcaagatttatcagttaaagtagaatcaagcttg
gaagaggtcccagtgaacatcacaccaaaccaagcagctgcaggtgctttcgtgaccaag
gaagactcaagctccacaaaaaggcagcgtatgagcacaagaactcctgtgaaggaaaaa
tccatctctgaggaagcgaaggcgaagagcacaactcaagaaatggcttcgtatcgatat
tcatcagttgaagtagattcaagctgtgaagaggtcccagcaaacatcacaccgcaccaa
gcaggtgcatgcacttttctggtcaaggaaaaaccaagctccacaaaagagcagtataag
agcacaaggagaactcctgtgaagaaaaaccccagctctgatgtagttaaggagaagagt
acaattcaagaaacagctttagattctcctattcctcggacacctgtaaagaataaggag
aagaatcatcgtccgcctatgtcatttcaacggaactcatttactttatcatgcagccta
aatggcaattctgagccagcattctgtcagaaaagtggtaggaaaagaaaggaacgcatg
tctgaaagagaatacaagcaaatgataaaccaatgcataggaaacatccagagtgaaatg
gaaagggactttgagttccctcttgatgtccctgtgatgaattaccatcagggtgcttac
caagaagaggattttacgtggccaccttctgctgatagtccagatgagaaggatgagctt
gatgatcttgatgatctttggaaagaaatggactactcattgaccacagtagcacttctt
gagcaaaagcagggcccagattcagaagcagttcatgagagcactgctggtttaggaaaa
aacggagaaataccatgtcatcatgactgcatactggatgaggagcatggactggtgtgc
agattatgcaatgttgtatgtactgaggcaaaggatatatttccagaaatggtcaatggt
aatgactataataagaagagacctggatgcagtaatttttaccatgatgagcatgtactt
gacccttctctttttgcaatcctgggaccagagctttcggaattgaggggctctgtgaac
ttgtggagtttaatacccgatctcgagcctaaactgcttcctcatcaaaggaaggcgttc
gagtttatttggaaaaacttggcgggatcattgcaacttgaggaaatgaataatccgaca
gccagtacaggtggctgtgtggttgcacatactcctggatccgggaaaacactgctgctg
atctcatttcttgtcagttacttgaaggttcacccgagaagccggccgttagttcttact
ccaaaatctgctatccacacatggaggagagaattcgagaaatggggtatttcacttcct
ctgcatgtgcttcaccatgctgacagaagtggcaagccaatgggggatattgatcctagg
ctgcaggcaatgttaagcaattttcgccagtcgtcctggaaaaatatgcgacttgtggat
tgtatggacaagttatgcaagtggcacgagagtccaagtattctcctcatgacgtactcg
tcgttcttagggatgacgagagaagacacaagaatgtcgcagcgagcattcatggcacaa
gtcctgatcaacaaccctgggctgttgatcctcgacgagggacacaaccccaggagcaac
aaatcgaagttgaggcgggtgcttatgaaggtgaagactgagtatagaatcctcctgtct
ggtacaatcttccagaataattttgaagagtatttcaacaccctatctttggccagacct
cggtttgtcaatgatgtcatgactgcacttgtcccagaaaggaagaaggaaaccagcagc
aggagagctaaacatatagaagcagtgacaaggcgcatttttgtggaaagagttgggcaa
aagatggagtctagcgacaattgggaccgggtcgatggcatcaatttgttaaacgagctt
acatgtggattcatcgattctttcgaagggtcaaagctaagcagccttccagggatacat
gcatatacccttttcatgaaacccactgacatccaaaaggagatactttcgaaaataacg
atggctacgtcatgcggtggccgttaccttcttgaggttgagcatctcatcacaatttgc
tctatccatccatggcttatgaaaaacaccaaatgtgctagcagttacttcactccagca
gaaatagataaagttgacaagtacaagagggacttggcagctggttgcaaggccaagttt
gtcatcgatctgctgcacaagtcctcctacaggggggagagggtgctgatattctgccac
aatgtgtccccgataaacttcttggtcaagttgatcgagtgtgtcttcggatggcgcctc
ggggaggaagtcctcgtgcttcaaggtaaccaggagcttcctgtccgttccgacgtcatg
gataaattcaatggtgacattgaaggaaagaggaaggtgcttattgcttcgacaacagct
tgtgccgagggtatcagcttgacaggtgcatcaaggttggtcatgctggattcagagtgg
aaccactccaagaccaggcaggcgatagcgcgggcgttcaggcctggccagcagagaacc
gtgtatgtctaccttctcgtggcatctggtacatgggaggaggagaagtacagcagcaac
cggagaaaagcttgggtagcgaaaatggtcttccatggacgctatttcgttgatccgttg
cagaacgccgtgactgctattgatgacagtgttctcaaggagcttgcggatgaagacaag
accaaaactttccataagatagttaagcaggactga
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