Lolium perenne (perennial ryegrass): 127331404
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Entry
127331404 CDS
T08650
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127331404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lper03032
]
127331404
03400 DNA repair and recombination proteins [BR:
lper03400
]
127331404
DNA replication proteins [BR:
lper03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
127331404
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
127331404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
127331404
NCBI-ProteinID:
XP_051213506
LinkDB
All DBs
Position
2:19921467..19928539
Genome browser
AA seq
1717 aa
AA seq
DB search
MSPHDGGGDDGRDGDGDGLLFAGVRFALAGFDPVTESQYRADMVERGGADAGGYGEAGCT
HVIVFGLVYDDPVCVAARGAGKKVVTELWVDDTLDTGAMADADRVIYRPVRDLNGIPGSQ
SLNICLTGYQKDGREDIMKMVSLMGAQFSKPLKADTVTHLICYKFEGEKYELAKKVNINL
VNHMWLEACLKAWEILPIDNYRKSGWEQEMMEAQVEDSADEADDAARVLSRSRGIARRSP
ITEIRMGAHVDPDVYAPIRDPTVSLGNAEVAAGRHLNTPKQVSKTEDVCERSLDARADIQ
STHNTNFVTNSADTEARNSVHSRINPCSNEKAPGDHITRDEEKNGDKGPVDARASALPTI
NTNGATECADHFVHQPTVIPAIPVVDTDNIADGSDLFIANSVQLPTPSAESLLEKPLQSS
DMTGKVDHKDNGPVANLVDGVGQSNSEGNIALVKANSISAGNSASKNSPILGYSRRRSRK
SVSPGTNLSSAHQTASLHSYERNSPNVKISISPSTKSNHTISKLADAKSPRDEATQCVDR
SDIVLAQTNSGLSSASPLPLNGGTDSAAGTANIPLPSREIASEAATVSDPAKKSTGSQPI
KVNGDLSVDVTVNHTVSQMSGSSKKKVLSYRRASLKLAKSPEVVEKLPEIFAKEAIIESL
AKAKELAQHELAAEKACAISPSLDSEFEKGSSSFSNQNWNIEMSNAPQVNSIEVAEVSHA
TMEAGAMKLSSSRVKSTGAKRSRNATNGAHTSFASRKREIATYKSRHNIGAVISHENIEA
DKEKDCTSPNAAECTTSFPEEILSSKARSVDTSSLNANSEVNGVPGASKLEFANLISQGN
INKKPRRLPSSANDNHYQRGSSEKVSSSIERSAVANVSQPADMKMAMAGAPTADKADTVS
LKSSFSEAAPQADTEKKMLSYRRASLKLAKSREVEKLPEIFAKDAIIESLDKAKELAQHE
VAPEKTCAISPSMDSEFEKASSSFSLQNRNIEASNAPQVNGIEVAATGSHHDKEVSHATM
EADSRKVWTSRVKSTSAKRSRNATNGAHTSFARRKRESATSESKHDIGAVISHENVEAEP
EKDCTSLTAAECTTSFPEEIRSSKARSVAASSLNANSEMNGVPGASKLEFANLISQGNIN
KKHRKLPSSANDNNYQKGSSEKVSSAIEKSAVANVSQPADMRMVMVCAATADKADTVSLK
SSFSEAVPQADTEKLSSSASADNHEPCAPDRVPNKRVRKAVAKRKISGALQYIPSEAEVL
TIKQAAESSTNAGKAMGKDLQSANEDGMANQAASFCKDSFEDGSEDMQNIRPMTSKKNKV
VDAMDDSVGQNKENIPVNVNLSPKSKYGNKCVGSKCMKKPVQKGKGVLCERSMTGGNDCG
TLSLSEPTWFILGGHRLLRKDYMSILRRLKGRVCRSSHHWSFQATHLIAPELRRTEKFFA
AAAAGRWILKADYLSACNEAGKFLEEESFEWHGDGLNSGDTISLDAPRKWRHLRERTGHG
AFHGMKIIIYGECISPSLDTMKRALRAGDGTILATSPPYTRLLKHDVSFAVVSAGMASTD
AWVQEFMNHNIPCVSADYLVEYVCKPGHPLSKHVLFNMHELAEKSLQKIQNSQRDELGAS
TGEAGEGGDTEPSCSACGSSNREGALMLICSGSQGNKASCGAGMHVDCLNLSPEAAAPDG
DWLCPKCDDDGQVKPPPKKAEKGARKLKPKAQMSSCC
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcacgacggcggcggcgacgatggacgcgacggcgacggcgacgggctcctc
ttcgccggtgtccgcttcgcgctcgccggcttcgaccccgtcaccgagtcccagtaccgg
gcggatatggtggagcgcggcggcgccgacgccggcgggtacggcgaggcggggtgcacc
cacgtcatcgtcttcggcctcgtctacgacgacccggtgtgcgtggcggcgcggggagcc
gggaagaaagtggtaaccgagttgtgggtggacgacaccttggacaccggagcgatggct
gatgccgaccgggtaatatacaggccagtgagagatctgaatggcattccgggcagtcag
tcgcttaacatatgcctgacagggtaccaaaaggatgggcgtgaagacataatgaaaatg
gttagcttaatgggagcacagttttccaagcctttgaaagcagacacggtcacccatctc
atttgctataaatttgaaggtgagaagtatgaacttgctaaaaaggtgaacatcaatctt
gttaatcacatgtggttggaagcttgcttaaaggcttgggaaattcttccaattgataat
tatagaaaaagtggttgggaacaagagatgatggaggcgcaagttgaggattctgcagat
gaagcagatgatgctgccagagtcttatctcgtagtagaggcattgccagaagatcccct
attacggaaattagaatgggagctcatgttgatcctgatgtctacgcccccattcgtgat
cctactgtctctcttggcaatgccgaggttgctgcaggaagacacttgaacaccccgaaa
caggttagcaaaacagaagatgtatgtgaaaggtcccttgatgccagagctgacatacag
agcactcataacacaaattttgtgacaaattctgctgatactgaggcacgcaattcagtc
cattctcgtattaatccctgtagcaatgaaaaggctcctggagatcacatcaccagagat
gaagaaaaaaatggtgataaggggccagttgacgctagggcaagtgcccttccaaccatc
aacacaaatggggccacagaatgtgctgatcattttgtacatcaaccaacggtgatacct
gctattccagtggtcgacacagacaacattgctgatggttccgacctgttcatcgccaac
agtgttcagttgccaacaccttctgcagaaagtctcttggagaaaccattgcagtcatca
gatatgactggaaaagtggatcataaggataatggacctgtagctaatcttgttgacgga
gttggtcaatcgaattcagaaggaaatatagccctggttaaggccaattcaatatcagca
ggcaattccgcatcaaagaattccccaatcttagggtactccagaaggcgttctcggaag
tcagtatcaccaggaactaatttaagttcagctcaccaaacagcatctctccacagctat
gagagaaattcaccaaatgttaagatcagtatctctccgtcaacgaagagcaatcataca
attagtaagcttgctgatgccaaaagcccgagagacgaagcaacacaatgtgtggataga
tcagacattgtacttgctcagacgaacagtgggctttcttcagccagtccattaccgcta
aatggaggcacagactcagctgccggaactgcaaatattcctctcccaagcagagaaatt
gcatctgaagcagcaacagtttctgatccggcaaaaaaatccactggatctcaacccatc
aaagttaatggtgacctaagcgttgatgttactgtgaatcatacggtgagtcaaatgtct
ggctcttctaaaaagaaggtgctgagctacaggagggcttctttgaagcttgcaaagtct
cctgaagtagtagaaaaacttcctgaaatttttgctaaagaggcgattatagagtcacta
gctaaagcaaaggaactggcacagcatgaactggcagcagagaaggcatgtgctattagc
ccttctttggattctgaatttgagaagggaagttcaagtttctctaatcaaaattggaat
atagagatgagtaacgcaccacaggttaatagcattgaagtggcggaggtttctcatgca
accatggaagcaggtgctatgaaactctcgtcgtctagagtgaagagcactggtgctaag
aggtctagaaatgccactaatggagcacacacttcatttgcaagtcgtaaacgtgagatt
gcaacctataagtccaggcacaatattggtgcagttatttcccatgaaaatatagaagca
gataaagaaaaggattgtaccagtccaaacgcagctgaatgtacaacatcctttcctgaa
gaaatcctgagcagtaaagcaaggagcgttgacacgagctctctgaatgccaacagtgag
gtgaatggtgtaccaggggcttcaaagctggagtttgctaatttgatttcgcagggaaat
ataaacaaaaaacctaggaggcttccaagcagtgcaaatgataatcactatcaaaggggt
tcatctgagaaggtttcaagttccattgaaaggagtgctgttgcaaacgtgtctcagcct
gctgacatgaagatggctatggctggtgcaccaaccgctgataaagctgatacagtatca
ttgaagtcgagtttcagtgaggcagctcctcaagctgacactgaaaagaagatgttgagc
tacaggagggcttctttgaagcttgcaaagtctcgtgaagtagaaaaacttcctgaaatt
tttgctaaagatgctattatagagtcactagataaagcaaaggaactggcgcagcatgaa
gtggcaccagagaagacatgtgctattagcccttctatggattctgaatttgaaaaggca
agttcaagtttctctctgcaaaatcggaatatagaggcgagtaatgcaccacaggttaat
ggcattgaagtggcagctacgggctcacaccatgacaaggaggtttctcatgcaacaatg
gaagcagattctaggaaagtatggacttctagagtgaagagcactagtgctaagaggtcc
aggaatgctaccaatggagcacacacttcatttgcacgtcgtaaacgcgagtctgcaaca
tctgagtccaagcacgacatcggtgcagttatttcccatgaaaatgtagaagcagaacca
gaaaaagattgtaccagtctgaccgcagctgaatgtacaacatcctttcctgaagaaatc
cggagcagtaaagcaaggagcgttgccgcgagctctctgaatgccaacagtgagatgaat
ggtgtaccaggggcttcaaagctggagttcgctaatttgatttcgcagggaaatataaac
aaaaaacataggaagcttccaagcagtgcaaatgataataactatcaaaaaggctcatct
gagaaggtgtcaagcgccatagaaaagagtgctgttgccaacgtgtctcagcctgctgac
atgaggatggttatggtttgtgcagcaaccgctgataaagctgatacagtatcgttgaag
tcgagtttcagtgaggcagttcctcaagctgacactgaaaagctttcaagcagtgcaagt
gctgataaccatgaaccatgtgcacctgatagagtaccaaacaagagagtgcgcaaagca
gttgccaaaaggaaaatttctggcgcactgcaatacataccatctgaagctgaagttctg
acaataaagcaggctgcggagagctccacaaatgctggcaaggcaatgggtaaggatctc
cagagtgcgaatgaggatggtatggcaaatcaagctgcatcattttgcaaagattccttt
gaagacggatcagaagatatgcagaacattagaccaatgactagcaaaaagaacaaggtt
gtagatgcaatggatgattctgtcggccaaaataaggagaatataccagtcaatgttaat
ctcagtcctaaatcaaagtacggaaataaatgtgtgggttctaaatgtatgaaaaaacca
gtacaaaagggcaaaggggtgctttgtgagcgcagcatgacaggaggaaatgattgtgga
accttgtccttgtcggaaccaacatggtttatcttaggtggacatcgcctactgagaaag
gattacatgtcaatacttagacggctgaagggaagagtatgcaggagttcacatcactgg
tctttccaagcgacgcatcttattgcacccgagctccgcagaactgaaaagttctttgca
gctgccgcagctgggaggtggatactcaaggctgattacttgagtgcttgcaatgaggct
ggcaagtttttagaggaagaatcatttgagtggcatggtgatggccttaacagcggcgat
acgataagtctggatgctccaagaaaatggcgccacctaagggagcgcactggtcatggc
gctttccatgggatgaagatcatcatatatggagagtgcatttctccatcattggacacg
atgaagcgtgcgctgagggctggtgatggcacaattctagcaacctccccaccatacacc
cggctactgaagcacgacgtcagtttcgctgtggtgtccgcgggcatggcgagcacagac
gcatgggttcaggagttcatgaaccacaacatcccctgcgtcagcgcggactacctggtg
gagtacgtctgcaagcccggccaccctctgagcaagcacgtgctcttcaacatgcacgaa
ctggcagagaagtccctgcagaagatacagaattctcagcgagatgaactcggcgctagc
accggagaggcaggcgagggaggcgacactgagccaagctgctccgcctgcggatcgagc
aaccgggaaggggctctgatgctgatatgcagcggcagccaggggaacaaggctagctgc
ggtgctgggatgcacgtcgactgcttgaacctgagccctgaagctgctgctccagacggt
gactggctgtgccccaagtgcgacgacgatggtcaggtgaaaccgcccccgaagaaggcc
gagaaaggtgccaggaaactgaagcccaaggcgcagatgagttcttgttgctga
DBGET
integrated database retrieval system
