Lolium perenne (perennial ryegrass): 127331556
Help
Entry
127331556 CDS
T08650
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127331556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127331556
Spliceosome [BR:
lper03041
]
Common components
Common spliceosomal components
SR proteins
127331556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
127331556
NCBI-ProteinID:
XP_051213692
LinkDB
All DBs
Position
2:27528610..27532853
Genome browser
AA seq
290 aa
AA seq
DB search
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGKIVEIDLKVPPRPPGFAFVEFEDPRDAED
AIHGRDGYNFDGNRLRVELAHGGRANSSSIPNSFGGGGGGGRRGGVSRHTEYRVLVTGLP
SSASWQDLKDHMRKAGDVCFSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDTEFKNAFSR
APIRVKEYAGKNSRSYSRSRSRSRSRSYSRSRSPSKSPKKKPSRRSASRSRSRSVSSHSP
AESKGRSPSRSPAKSMSPNASPANGVAASPKKRSPSRSPSRSRSPDAKSE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggcgctggagccggactatttacgtcgggaacctccccggggatatccgggag
agggaggtggaagatctattctacaagtatggaaagatagtcgaaattgacttgaaggtc
cccccaaggccgcctggctttgctttcgtggagtttgaagatccccgtgatgctgaagat
gcgattcatggtcgagatggctataactttgatgggaaccggctgagggttgaacttgca
catggagggagggctaactcttcatccatcccaaacagctttggtggtggtggtggtgga
ggacgccgtggtggtgtctctaggcacacggaatatcgtgttctggttactggactacct
tcttctgcatcatggcaggatctgaaggaccatatgagaaaggctggtgatgtttgtttc
tctgaggtgtatcgtgagggtggtggtacaataggaattgttgattatacaaactatgat
gatatgaagtacgctataaggaagcttgatgatactgaatttaaaaacgccttctctcgg
gcgcctataagggtgaaggagtatgctggcaaaaacagccgctcctattcacgaagccgc
agcagaagccgaagtcgcagctacagcagaagcaggagtccaagcaagtctccaaagaaa
aaaccttcacgccgttcagcgtcaagatctcggtcgagatcagtgtcttctcattcacca
gcagagtcaaagggacgttctccatcaagatcaccagcgaaatccatgtcccctaatgca
tctcctgccaatggtgtagcagcaagcccaaagaaacgtagcccaagcaggagcccatca
cgttcccgatctcctgatgccaaatcagaataa
DBGET
integrated database retrieval system
