Lolium perenne (perennial ryegrass): 127331756
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Entry
127331756 CDS
T08650
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127331756
03036 Chromosome and associated proteins [BR:
lper03036
]
127331756
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127331756
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127331756
SLIK complex
127331756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HTH_CHD1_Hrp3
CHD1-like_C
HDA2-3
ResIII
DEAD
SLIDE
Chromo_MIT1
KH_PARP14_5
Motif
Other DBs
NCBI-GeneID:
127331756
NCBI-ProteinID:
XP_051213902
LinkDB
All DBs
Position
2:33885161..33900906
Genome browser
AA seq
1731 aa
AA seq
DB search
MAFFSNSGSRADSGGYNLNEKADDEGAYESVADRDVDLNSGHLNLNEKADDAYHSEEEQY
QPGPNSPEIKSGQNAQRLGGPSDPWGTGFLKDCRSTHTAMDEPSNSGRVMENGYVAGSHD
DMDGSGEDDELNRGHGDVPAEEMLSDDYYEQDEEDQIDSLNRRGMSHPSCSNSTVAAKSV
PSRQKKSTKRSAYGDDDDDDDDDENDDDDDDADEDDPDDVDFEPDSETDKAAVKDKLAES
ENSGEEEEDDDELELSDDDEDDFIESRRQSKRLKVGGAKAPQRRKPPMQAPRKRGVSLTD
EEYSSGKDSDVPNNADFSHRSKKPVRLHLKTVGHNDVFSNVNSHNESRTSGRRRTLRNIS
YAESEESDDSEEKSAKQQKILKEDQDEEDTETIERVIWYQPKGVAEDALRNDRSTQPTVM
SMPSDFDLQWDDVEFYIKWKGQSYLHCQWKTLSELRSVSGFKKVLNYMKRVSEEQRFKRS
LSREEVEVHDVGKEMELDLIKQYSQVERVFADRATKVDGDDVVVPEYLVKWQGLPYAEST
WEKDTDIEFAQEAIDEYKAREVATAILGKAVDFQRKKSKASLRRLDDQPEWLKGGKLRDY
QLEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSMLGFLHNAQEINGPFLVVVPLSTLSN
WAKEFRKWLPDMNVVIYVGNRASREMCQQHEFFTNKKGGRHVKFHTLITTYEVILKDKSV
LSKIKWNYLMVDEAHRLKNCEASLYITLLEFSTKNKVLITGTPLQNSVEELWALLHFLDP
VKFNSKDTFVERYKNLSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRIEMS
PLQKQYYKWILERNFQNLNKGVRGNQVSLLNVVVELKKCCNHPFLFESADHGYGGDSIGD
RNKVERIVMSSGKLVLLDKLLLRLRETNHRVLIFSQMVRMLDILSEYLSLRGFQFQRLDG
STRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMS
RAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKETKKGAS
MFDKNELSAILRFGAEELFKEEKTDEETKRKLESMDIDEILERAEKVETKAAEGEEGNEL
LSAFKVANFSSGEDDATFWSRLIQPDAEDMVQETLAPRAARNKKSYVEDHQLDKNSNRKR
RAVDAQEKPRRRSSRTVDTIVSLPLIDGAVAQVREWSFGNMPKKDASRFVRAVKKFGNPS
QIGLIVDDVGGAIAKAPYEAQIELYDLLIDGCQEAVKENTDVKGTVLDFFGVPVKAYELL
ARVEELQCLAKRIARYKDPVRQYRIQSPYKKPQWSASCGWIETDDARLLLGIHWYGYGNW
EKIRLDPNLGLTTKIAPATLGERETFLPRAPNLDNRASALLQKEFANLSGKSSKAKGGSS
QPVNSESNGGARSSRGRQKDAKPKDDIKSIKDDIKKRKVVEAEAREEGEISESEAETKYR
LDKEEKWLEWCSEVLDDEQDILKRLDRLQNTSVNLPKEKVLSRIRRYLQIIGEKIGKVVV
QHGESYKQSRMTTRLWNYVATFSNMSGDQLRDLYLKLSQDQMEAGVGPSHGGNFAPVPPN
RGGASNQPHPPRNQRSTRSFQSTPESLNNGENTGNSEAWKRRRRADPENQFDTQPSYQPP
PIMTNGNRVQESSSSAGILGWGPVEMRRYGMERPKRGVHPNRFPGGPGPLL
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggcattcttcagcaattctgggagcagggctgattcgggagggtacaacttgaacgag
aaggccgacgacgaaggtgcatacgagtcagttgcggatagggacgtcgacttgaactct
gggcatctaaacttgaatgagaaggctgatgatgcttaccacagtgaggaggagcagtac
cagccagggccaaattctcccgagattaaatcagggcagaatgcccagagactaggtggc
ccgtctgacccatggggtacaggttttttgaaggattgcagatccacgcacaccgcaatg
gatgaaccttcaaatagtggccgggtaatggaaaatggatatgtggctggttcacatgat
gacatggatggtagtggagaagatgatgagctaaacagagggcatggggatgtgccagct
gaggaaatgctttctgatgactattatgagcaggatgaagaggatcagattgattcattg
aatcgtcgtgggatgagccacccaagctgttccaattctaccgttgcagcaaaatctgtc
ccctcaagacaaaagaagtcaacaaagcgtagtgcttatggcgatgatgacgacgacgac
gatgatgatgagaatgatgatgatgacgatgacgcagatgaagatgatccagatgatgta
gattttgagccagacagtgaaaccgacaaggctgctgttaaggataagcttgcggagagt
gagaactcaggtgaagaagaagaagatgacgatgagcttgagctctcagatgatgatgaa
gatgattttattgagagtaggaggcaatcaaaacgacttaaggttggaggagcaaaagct
ccccagcgaagaaagcctcccatgcaggctccacgcaaacgaggggtatctctcacagat
gaagaatattcttcaggaaaagactcagatgtacccaataatgctgattttagtcaccgg
tcaaaaaaacctgttaggttgcacctgaaaactgtgggccataatgatgttttctcgaat
gtcaattcccataatgaatcccgaacttctgggaggaggaggacactgagaaatatctca
tatgctgaaagtgaagaaagtgacgatagtgaggagaagtctgctaaacaacagaagatc
ttgaaggaggatcaagatgaggaagacacagaaacaattgaaagggtcatttggtatcag
ccaaagggtgttgctgaagatgcactaaggaatgatcgatcgactcaacctactgttatg
agcatgccatcagattttgatctgcaatgggatgatgtagagttctatataaaatggaaa
gggcagtcttacctacattgtcagtggaagacactgtctgagcttcgtagtgttagtgga
tttaaaaaggttctaaattacatgaaaagagtgtctgaggaacagaggttcaagaggtcg
ctatcacgcgaagaggtcgaggtgcatgacgtgggcaaggaaatggagttggatcttatt
aagcaatatagccaggttgaacgggtatttgctgatagggcaaccaaagtggatggtgat
gatgtggtggtgccagagtatttagtgaaatggcaaggacttccttatgcagaatctacc
tgggaaaaagatacagatattgaatttgctcaagaagcaatagatgaatacaaggcccgt
gaagttgccactgctatactgggaaaagcggttgatttccaaaggaagaaaagcaaagct
agtttgcggaggcttgatgaccaaccagagtggctaaaaggaggtaaacttcgcgattat
cagcttgaaggcctaaactttctcgttaatgggtggaggaatgatactaatgttattctt
gctgatgagatgggtctgggaaaaaccattcaatcagtttccatgcttggcttccttcat
aatgctcaagaaattaatggtccatttcttgttgtcgtcccactttcaacattgtcaaat
tgggcaaaagaatttcggaagtggctacctgacatgaatgttgtaatttatgttggaaat
cgtgctagcagagagatgtgtcagcagcacgagttttttacaaataagaaggggggccgg
catgtaaaattccatacattgattactacttatgaggtgatacttaaggacaaatctgtc
ctttcaaaaatcaaatggaattatcttatggttgatgaagctcaccgtttgaagaactgt
gaagcatcactgtatattactcttttggaattcagcaccaaaaataaggttctaataact
gggacccctttgcagaatagtgttgaagagctgtgggccctacttcatttccttgatcca
gttaaattcaacagcaaagatacttttgttgagagatacaaaaatttgagttcgtttaat
gaaactgagcttgcaaatcttcacaaggaattgaggccccatattttaaggcgagttata
aaagatgttgagaaatctttacctccaaaaattgagcggattcttcgtatcgaaatgtct
cccctacagaaacaatattacaagtggattctagagcgaaattttcagaatctgaataaa
ggagtccgtggaaatcaggtttcgcttttgaacgttgttgtcgagttgaagaagtgctgc
aatcatccattcttgtttgaaagcgccgatcatggttatggtggagacagcattggtgat
cgcaataaagttgaacgcattgttatgagtagtgggaaattagttttattagacaaacta
ttgctaagactgcgggagactaatcaccgagtgcttatattctctcagatggtgaggatg
ttggacatcctttctgagtacctgtcccttcgaggattccagtttcagagacttgatggc
agtacaagagcggatcttcgtcatcaggccatggagcactttaatgctcctggaagtgat
gatttttgtttccttctgtctacacgtgctggcggacttggtatcaatctcgcaacagca
gatacggtgataatctttgattcagattggaatcctcagaatgatctacaggcgatgagt
agggcacataggattgggcaacaagagactgttaacatctatcgtttcgtcacctgcaaa
agtgttgaagaagatatattggagcgggcaaagaaaaaaatggttcttgatcacttagtg
attcagaagctgaatgctgagggcaggctcgagaagaaagaaactaaaaagggagcatca
atgtttgacaagaatgaactttcggccatacttaggtttggggcagaggagttgttcaaa
gaagagaagaccgatgaagagaccaagaggaagcttgaaagtatggacatcgatgaaatt
cttgagagagctgagaaagttgaaacaaaggctgctgaaggagaggagggcaatgagctt
cttagtgctttcaaggttgccaatttttcgagcggtgaggatgacgccacattctggagt
agactgatacaaccagatgctgaagatatggttcaggaaactttagcacctcgtgctgcg
cgaaataaaaagagctatgttgaagatcaccaacttgacaaaaatagcaacaggaaacgg
cgagcggttgatgcacaagaaaagccgagaaggcgctctagcagaacagtcgatacaatt
gtttcattaccattgattgatggagctgtagctcaagtacgtgaatggtcatttggaaac
atgcctaagaaggatgcctcccgatttgttcgagcggttaaaaaattcggaaacccaagc
caaattggcttaattgtggatgatgtcggtggtgcaatagcaaaggctccatatgaagca
cagattgagctgtatgatttgctcattgatggctgtcaggaagctgttaaagagaacaca
gacgtcaagggcacggtgttggatttttttggtgtacctgtgaaggcctatgagttatta
gctcgtgtcgaagagcttcagtgcttggcaaagcgcattgcacgttacaaagatccagtt
aggcaataccggatccaatctccttacaaaaagccgcagtggtcagcaagctgtggatgg
attgaaactgatgatgcaaggttgctgcttggcattcattggtatggttatggaaactgg
gagaagatacggttggatccaaatcttggcctgacaacaaaaattgcaccagcaacactt
ggtgaaagagaaacgtttttaccacgtgccccaaacttggataatcgtgctagtgctctc
ctgcaaaaggaatttgccaatctgagtggaaagagctcaaaagccaaaggaggctctagt
caacctgtcaatagtgaaagcaatggtggtgcccgatcatcgagaggccgacaaaaagat
gcaaaaccaaaagatgatattaagtcaatcaaagatgacattaagaaacgcaaggtggtg
gaagctgaagcaagagaagagggtgaaatttcagagtctgaagcagagactaaatatcgt
ttggacaaggaggaaaagtggctggaatggtgctctgaagttttggatgatgagcaggac
atattgaaacgcctggataggctacagaatacaagtgtaaaccttccgaaggaaaaggtt
ctttcaaggatacgcaggtatctccagataattggtgaaaagataggaaaggttgttgtc
caacatggagaatcatacaagcaatcccgtatgaccacgagattatggaattatgtggca
accttttcaaatatgtccggggatcaattgcgcgatctctacttaaaacttagtcaggac
caaatggaagctggagttggcccctcacatgggggcaattttgcaccggttcctcccaac
agaggaggtgcttcaaatcagcctcatcctcctagaaaccaaaggtcaacaaggtctttc
cagagcactccggagtctctcaataatggtgaaaacactgggaattcggaagcttggaaa
cgacggaggagagctgatccagaaaatcagtttgacacccaaccatcgtatcaacctccc
ccaatcatgacaaatggaaacagggtgcaggagtctagcagttctgctggtattcttggt
tggggtccagtcgaaatgagacgatatggcatggaaagaccaaaacgaggtgttcatccc
aatcgatttcctggtgggcctggacctttgctttag
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integrated database retrieval system
