Lolium perenne (perennial ryegrass): 127332073
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Entry
127332073 CDS
T08650
Name
(RefSeq) uncharacterized protein
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
lper03015
mRNA surveillance pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127332073
09122 Translation
03013 Nucleocytoplasmic transport
127332073
03015 mRNA surveillance pathway
127332073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127332073
03041 Spliceosome [BR:
lper03041
]
127332073
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127332073
Spliceosome [BR:
lper03041
]
Complex C
Other components
EJC/TREX
127332073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP
RSB_motif
Motif
Other DBs
NCBI-GeneID:
127332073
NCBI-ProteinID:
XP_051214279
LinkDB
All DBs
Position
2:complement(49708386..49714097)
Genome browser
AA seq
1042 aa
AA seq
DB search
MSTYPVLNDQPIDQWEVMELKDELCRRNLPIDGLKEDLVKRLFDDLQGDMLGREGTVNGS
SPDDDLKEDEATGSADASVCQAVMEPSVDENPSLVSAQNGDVVVSVAEASKESEVATGNV
SHKFVVTTQEVSQKPLAAAAAEVSDAPLVDVLTTAATKQDDLESAPSDSTMVMDVQEEAG
AHSEFIAEKALDEDAGKKTIVDYLFATTDVKLDVSPAKGKLDDDILEHEVVPSPLDAVVP
RADHWDVDAVAAALGHDGDAMIPKISSVDNDLMNCKDHEDSGLTSNACKLTISGPIDQTT
GTLPATMPTYPVLNNQAIDQWKVTELKDELSKRNLPVKGLKDDLVKRLFKDLEGDILGGS
PCSYDLKVDGTPGSVDASVCQDVMEQNVDEGPSQVATQEGSSDTTTDVSHDAVATTEEVN
QTTLLAATDSDSPLVDSATADTISLSDAVATKRDDLESAPSDGAILKAASLKADCHSKII
AEKAPEEGTFKEAVVDYLPYDVASTNVKLDATSAKGKLDADIIEKEAVLSLPDAIALHTD
HLDVHAFATSPGQNAKTLIPNIDLGDNAFMSNKDRKDSGHTNDACKPSLSGTKDQVSEAN
PDIGSQIKCVLISHEDISTNVKGDLNADNSDLELEAKRDMVKPPPCRIPSVGDDLQALDD
EKQLCKKGTQLQEIRSMTNMDLDKKEDSPNGVSPEKVNLERTSGNESIEEDAMESKHVIP
NIRSDDVGREIEVTSDHEVKEVVLFDTVDSSVQTKDNVAKEKSVAPSEKRKPEDQVVAVD
PNKRQRRVDSVKLPKEQTSKSSSICPKGVVQPAIKRSFGRSGSVASGDSHIERTVPLSQK
PATTSLKIDRFVRPFTLKAVQELLGRTGSICSFWMDHIKTHCYVTYSSVDEAVATRNAVY
NLQWPLNNGSYLLAEFVDPLEVKLKLEHPPPPPAPISLSEDTTQQAVGFQQSKPNQTMLP
DGAGALRGLLPTPQPLKLFPASKPGSDRDMLPPPPKEIKAPAMSLADLFKRTQAPPMIYY
LPLTEEEVAAKLAARSRRRKRG
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgtatcctgtgctgaatgaccagccaattgatcagtgggaggtcatggaactg
aaggatgagctctgtaggaggaacctacctatcgacggtttgaaggaagatcttgtcaaa
aggctctttgacgacctacagggtgatatgcttggcagagaaggaacagtcaatggatct
tcccctgatgatgatctgaaagaggacgaagcaactggttctgctgatgcatctgtttgc
caggctgtgatggaaccaagtgttgatgaaaatccttctctggtttcagcgcaaaatggg
gatgttgttgtttctgttgcagaagctagtaaggaaagtgaagttgctactggaaatgtt
agccacaaatttgttgttactactcaagaagttagtcagaaacctcttgctgctgctgct
gcagaagttagtgatgccccactagttgatgtgttgacaactgcggcaactaagcaagat
gatctagaatcagcgccatctgacagtactatggtgatggatgtgcaagaagaagctggt
gctcatagtgagtttattgcagagaaggctctagacgaagatgctggcaagaaaacgatt
gttgattatctatttgccactactgatgtcaagttggatgtgtctcctgctaaaggcaag
ttagacgacgacattctagagcatgaagtggtaccatcacctctggatgctgttgtgcct
cgtgctgaccattgggatgtcgatgctgttgcagctgcactaggacatgatggtgatgcc
atgattcctaagataagttcggttgacaatgatttgatgaactgcaaggaccacgaagat
tctgggctcacaagcaatgcttgcaaactaaccatatctggaccaatagatcagacaact
ggaacattgccagcgacaatgccgacatatcccgtgctaaacaaccaagcaattgatcag
tggaaggtcacagaactgaaggatgagctctctaagaggaacctacctgtcaaaggtttg
aaagatgatcttgtgaaaaggctctttaaggaccttgagggtgatatacttggtggatct
ccctgcagttatgatctcaaagtggacggaactcctggttctgtggatgcatctgtttgc
caggatgtgatggaacaaaatgttgatgaaggtccttctcaggttgcaactcaggaagga
agttccgacactactacagatgttagtcatgatgctgtagctactaccgaagaagttaat
cagacaactcttcttgctgctacagatagtgattctcctctagttgattctgcaacagct
gatacaatttctctaagtgatgcagtggcaactaaaagagatgatctagaatcagctcca
agtgatggtgctatattgaaggcagcatctctaaaagctgattgccatagtaagataatt
gcagagaaggctccagaagaaggcaccttcaaggaagctgttgttgattatctaccatat
gatgtagccagtactaatgttaagttggatgcaacctctgctaaaggcaagttagacgct
gatatcatagagaaggaagcagtattatcacttccagatgctattgcactacatactgat
catttggatgttcatgcttttgcaacttcacctggccagaatgcgaagaccctgattccg
aatatagatttgggtgacaatgctttcatgagcaacaaggaccgcaaagattctgggcac
acaaatgatgcctgcaaaccatccctgtcaggaacaaaggaccaagtctctgaggccaac
cctgatataggttctcaaatcaagtgtgtattgatttcacatgaggatatatcaactaat
gtaaagggtgacctgaatgctgacaattctgatttggaactagaggcaaaacgggatatg
gtcaaaccaccaccatgcagaattccctccgtaggtgatgatttgcaggcattggacgat
gaaaagcagttgtgtaagaagggaacccaattgcaagaaataagatctatgaccaatatg
gacttggacaagaaagaggacagtcccaatggtgtttctcctgaaaaagtaaatttagag
aggacctcaggtaatgaatcgatagaggaggatgccatggaaagtaagcatgttattccc
aatatcagatctgatgatgttggaagagaaattgaggttacctcggaccatgaggtaaaa
gaggtggtgctctttgatactgttgattcatctgtgcaaacaaaggataatgtagccaag
gagaaatcagtagctccatctgaaaagaggaaaccggaagaccaagttgttgcagttgac
cccaacaaacgtcaacgccgtgtggatagtgtcaaacttcctaaggaacaaacatccaaa
agtagctctatttgtccaaagggtgtcgttcagcctgctataaaacgttcttttggcagg
tctggttctgtggcaagtggagattcccacatagagcggacagtgccactttctcagaag
cctgcaactacttccttgaaaattgatcgttttgtgcgcccatttactctgaaagctgtg
caagagcttcttggtagaactggatctatttgcagcttttggatggatcatatcaagact
cactgctatgttacatactcttcagtggatgaagctgtggctaccaggaatgctgtttac
aacctccaatggcccctaaacaatggcagttacttacttgccgaatttgtcgatccactt
gaggtgaagctcaaacttgaacaccctcctccaccaccagcaccgatcagcctcagcgaa
gatacaacacagcaggcagtaggcttccaacaatcaaagcctaaccaaaccatgcttcct
gatggcgcgggtgccttgaggggtctgttgcctactccacaacctctgaaattgtttccg
gcctctaagcctgggtcagatagggatatgcttccaccccctccaaaggaaattaaagca
cctgccatgtcgcttgctgatctcttcaagcggacacaggcccctcccatgatttactac
ttgcccttaactgaagaggaggtggcagcaaagctcgcagcacgcagcagacgaaggaag
agagggtag
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