Lolium perenne (perennial ryegrass): 127332125
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Entry
127332125 CDS
T08650
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lper04131
]
127332125
04121 Ubiquitin system [BR:
lper04121
]
127332125
Enzymes [BR:
lper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127332125
Membrane trafficking [BR:
lper04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127332125
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127332125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
DUF7129
Zn_ribbon_6
Zf_IFT144_1st
zf-RING_16
zf-Nse
HypA
DUF8054_C
Motif
Other DBs
NCBI-GeneID:
127332125
NCBI-ProteinID:
XP_051214338
LinkDB
All DBs
Position
4:260073093..260075338
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AA seq
288 aa
AA seq
DB search
MSGGRQSYWCFQCRQRVRPRGREMECPHCDSGFVAEMDDVDTLMSQFVGMDSDFHRDPRF
GIMEAMSAVMRHGMGGMSREVDVRRRPSILSDLEMEFGAGPWLLFRGQLPGHVSEDNGFD
VFVNGRRGVGMRRANIADYFVGPGLEDLIEQLTHSDRRGPPPASQSSIDAMPTVRITSRH
LTGDSHCPVCKEKFELGSEAREMPCKHLYHSDCILPWLEQHNSCPVCRYELPTQGSTGAS
CSRSRSTNQNHSSSSSSSSTRASGRQRRRNPFSFLWPFRSSSSSSSSR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggtaggcaatcgtactggtgcttccagtgtagacagcgggtcaggccccgt
ggccgggaaatggagtgtccgcactgcgattccgggttcgtggctgaaatggatgacgtc
gatactctcatgagccagtttgttgggatggatagcgattttcaccgtgacccgaggttc
gggatcatggaggccatgtctgccgtgatgcggcatggaatggggggcatgagtcgagag
gttgatgttagaagaaggccaagcatactgtctgacctggagatggagtttggtgcaggg
ccatggttgctcttccgtggccagctccctggtcatgtctcggaggacaatggtttcgac
gtgttcgtcaatggacgccgtggtgttggcatgcggagggcaaacattgcagactacttt
gttgggcctggattagaggatctgatcgagcagttgactcatagtgaccgcagagggcca
ccacctgcatctcagtcctcgattgatgctatgcctactgttaggatcacttcgaggcat
ctcactggcgactcgcattgcccggtctgcaaggaaaagttcgagctgggatcagaagca
agagagatgccgtgcaaacatctataccactccgattgcatacttccttggctggaacaa
cacaattcctgccctgtttgccggtatgagctgccaacacagggctctaccggtgctagc
tgctcacggtcaagatcaacaaaccaaaatcacagctcaagcagttcaagtagcagtacg
agagccagtgggcgccagaggagaaggaacccgttctcgttcctatggcctttccgctca
tcaagttctagctctagttctcgttag
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