Lolium perenne (perennial ryegrass): 127332531
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Entry
127332531 CDS
T08650
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04120
Ubiquitin mediated proteolysis
lper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127332531
04120 Ubiquitin mediated proteolysis
127332531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127332531
Enzymes [BR:
lper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127332531
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
U-box type E3
127332531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
127332531
NCBI-ProteinID:
XP_051214801
LinkDB
All DBs
Position
4:complement(238067176..238074558)
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AA seq
1038 aa
AA seq
DB search
MASPSTPAPSRPQRSPDEVEDIILRKILLVSLTPPSSPNPAVAYLELTAAELLSESRPLL
ALRDTAERVLIDRLSLPDPPATSPPPFAFLAAAFRRAADEARKISTIRDSALQARLKASI
AHIRGLILSYARIVAGNPDTFPSPPNAPHPAAELLIFLLAEAADSLDPTPAPGAPPPPGF
LDELLGNADYEAIEPVMAELYERLRQRVDKVSALGDFQRPLRVLRRLVGIPNCAKALVEH
PKWIPKNQIMLIGEGRVMELYSLLGAFFHVSAIPDREFASQPDVGQQCFSEASSRRPADL
MSSFATIKSVMNNLQDGLRDILLVLLKNLDTRDKVLEYLAEVINKNVGRSRMQVDPLKCA
SSGMFVNLSAVMLRLCEPFLDQMESKKDKIDVKYLFCNDRINFKDLTAINASSEEVSSWI
ESWSYAHAQDDSSGVARSVESQESTSSGKSSSVSLPSKGGPPARGSKKENFSFICECFFM
TARVLNMGLMKAVADFKHLSQDLARYEDDLESNKVLREQSDSSPQLEQDIKRLEKIVAVL
SQEKYCYEAQIIRDGAFLQRALSFYRLMVLWSVDLVGGFKMPLPSQCPKEFSCIPEHFLD
DAMDLLALTSRVPKALEGFPLDDFLNFNIMFMSSSSYIKNPYLKAKMVEVLNCWMPQRSG
LKSTASLFEGHQLCLDYLVKNLLKLYVDIEFTGSHTQFFDKFNIRHNIAELLEYLWDVPS
HRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKEIEAEMANTVAWNSRPV
QEREERLRVFHQSENIVRFDMKLANEDVGMLAFTSEQIPAPLLLPEMVERVASMLNYFLL
QLAGPQRKSLTVKDPEKYEFKPKQLLKQIVTIYVHIARGDKEAIFPAAISKDGRSYNEQL
FASAGNILWKIGVDPQIIQEFTQLASKAKAAASEALDAEAILGDIPDEFLDPIQYTLMED
PVILPSSRVTIDRPVIVRHLLSDSTDPFNRSHLTQDMLLPDTDLKLRIQEFVRSQQSRKR
PAADSKMGEPDGAVDMVE
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccccgtccactccggcgccatcgcggccgcagcgctcccccgacgaggtcgag
gacatcatcctccgcaagatcctcctcgtctccctcacgcccccgtcctcccccaacccc
gccgtcgcctacctcgagctcaccgccgccgagctcctctccgagtcccgcccgctcctc
gcgctgcgcgacaccgccgagcgcgtcctcatcgaccgcctctccctcccggacccgccc
gccacctcgcctccccccttcgccttcctcgccgccgccttccgccgcgccgccgacgag
gcgcgcaagatctccacaatccgcgactccgccctccaggcgcgcctcaaggcgtccatc
gcccacatccgcggcctcatcctctcctacgcgcgcatcgtcgccggcaacccggacacc
ttcccctcgccccccaatgcgccccacccggccgccgagctgctcatctttctgctcgcc
gaggccgccgactcgctcgaccctaccccggcccccggcgccccgccgccgccgggcttt
ctcgacgagctcctcgggaacgccgactacgaggccatcgagccggtcatggccgagctc
tacgagcgtctcaggcagagagtagacaaggtatcagcgctcggcgacttccagcgccca
ctccgtgtgctcaggcggctcgtggggatccccaattgcgccaaggctctagtggaacac
cccaagtggattcccaagaatcagattatgctcattggggaagggagagtcatggagctc
tacagcttgctcggagccttcttccacgtcagcgctatccctgaccgcgagtttgcaagc
cagcctgatgtcgggcaacagtgcttctccgaggcatcatcacgccgtccagctgacttg
atgtcatctttcgcaactatcaagagtgttatgaacaacttgcaggatggactaagggat
attcttctagtgctgcttaaaaatctggatactcgagacaaggtccttgagtatctagca
gaggtgataaataaaaatgtgggaagatctcgcatgcaggtggaccctttaaaatgtgct
agttcgggtatgtttgtcaatcttagtgctgtgatgctccgtctatgtgagccttttttg
gatcaaatggagtctaagaaggacaagattgatgtcaagtacctgttctgcaacgacaga
atcaatttcaaagatttgaccgcaataaatgcctcttcagaagaagtgtcatcatggata
gagagctggagctatgcacatgctcaagatgattccagtggagtggctcgctctgtggaa
tcacaggaatccacaagctcgggcaaaagtagctcagtttctcttccttctaaaggaggg
ccaccagcgaggggctcaaaaaaagagaatttctcttttatttgtgaatgtttcttcatg
acggcaagggtacttaatatggggttgatgaaagctgtagcagacttcaaacacctctct
caggatctcgcaagatatgaagatgatttggaatcaaataaagtattgagagaacaatca
gacagttcaccacagcttgagcaagatataaaacgcttggagaagatagtcgcggtttta
tcacaagagaagtactgctatgaagctcagataataagagacggtgcatttcttcagcgt
gcactatctttctacagattaatggtattgtggtcagtagatcttgttggcggatttaag
atgcctttgccatcacaatgccctaaggagttttcttgcattccggagcattttcttgat
gatgcaatggatttacttgctctaacctctagagttcctaaagctttggaaggcttcccg
ttggatgactttctcaatttcaacatcatgttcatgtcgagttcttcttacattaaaaat
ccttatctaaaagcaaagatggttgaagttttgaactgctggatgccacaaagaagcggc
ttgaaatccacagcctcgttatttgaggggcaccaactatgtcttgattacctagtaaaa
aaccttctaaagctttatgtggacattgaatttactggctcccatacacaattctttgac
aaatttaatattcgacacaatattgctgagcttcttgagtatttatgggatgttcccagt
catcgaaatgcttggagacaaatagctaaagaagaggagaagggcgtgtatttgaatttt
ctgaacttccttatcaacgatagcatttatcttctcgatgagagtttgaacaaaattctt
gaactcaaggaaatagaggctgaaatggctaacactgttgcgtggaatagcagacccgtt
caagaaagagaggagcgtttgcgtgtatttcatcagtcagagaatattgttcgttttgat
atgaagctggcaaatgaggatgttgggatgcttgccttcacgtcagagcaaattccagcg
ccgttgcttcttccagaaatggtggaaagggtggcaagcatgttaaattacttcctcttg
caacttgctggtccacagaggaaatcgttgaccgtaaaggatcccgagaagtatgagttc
aaaccgaagcagctattgaaacagattgttaccatctatgtccacatcgcaaggggtgat
aaggaagctatcttccctgctgcaatctcgaaagatggacgatcatacaatgagcagttg
tttgctagtgcaggtaatattttgtggaagatcggggtagatccccaaatcatacaggaa
tttacgcaactcgccagtaaggcaaaagctgctgcctctgaggccttggatgctgaagct
atccttggggatataccagatgaatttctggatccaattcagtatactctcatggaagac
cctgtgatactaccatcgtcgcgggtcacaatcgatcgtccagttattgtccggcatttg
ctcagtgacagtaccgatccgttcaaccggtcccatctcacacaagacatgctgttacca
gacacagatctcaagttgcgcatccaagagtttgtcaggtctcagcagtccaggaaacgg
ccagctgccgactccaagatgggggagcctgatggtgctgttgatatggtcgaatga
DBGET
integrated database retrieval system
