Lolium perenne (perennial ryegrass): 127332586
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Entry
127332586 CDS
T08650
Name
(RefSeq) serine/arginine-rich splicing factor SC35
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127332586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lper03041
]
127332586
Spliceosome [BR:
lper03041
]
Common components
Common spliceosomal components
SR proteins
127332586
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
127332586
NCBI-ProteinID:
XP_051214859
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All DBs
Position
2:complement(52007928..52011228)
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AA seq
240 aa
AA seq
DB search
MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGDVVDIYIPRDRRTGDSRGFA
FVRYKYEDEAQKAVDRLDGRLVDGREMMVQFAKYGPNAERIQKGRIMETLPRSRGRSRSR
SPRRGYRDDHRGRDYSRRRSRSPSRERYGRDRHTERDYHRRSRSRSYSPDDYRRRGRDRS
PSRSRSRSYSPEDDNRRGRASVSPACRSPSRSPRRTPSSREGSPVKRNEDRSPRSRSPST
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcttcggacgctccggcccgccgccgatccgcgacacctactccctcctcgtc
ctcaacatcaccttccgtacgacggctgacgacctcttcccgctcttcgacaagtacggc
gacgtagtcgacatctacatccccagggaccgcaggactggcgactcgcgagggtttgcc
ttcgtgaggtacaagtacgaggacgaggcgcagaaggcagtcgatcgactggacgggagg
ttggtagacgggagggagatgatggtgcagttcgccaagtacggcccaaacgctgagcgg
attcaaaaagggagaatcatggaaacgctcccaaggtcaaggggtcgttccagaagccgc
agtccaagacgggggtaccgggatgatcatcggggaagagattattctagaaggcgaagt
cggagtccgagtagagagcgatatggccgtgacaggcacacagagagggattatcatcgt
cgtagcaggagtcgcagctacagtcctgatgattacaggaggcgtggcagggacagaagc
cctagtcgtagcaggagtcgcagctacagtcctgaggatgacaacaggcgtggcagagcc
agtgtgtcgcctgcgtgtagaagccctagtcgttcacctcgcaggacgccatcttctcgt
gagggatctcctgttaagcgcaatgaggaccgatctccacgctctcgtagcccttcaaca
taa
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