Lolium perenne (perennial ryegrass): 127333692
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Entry
127333692 CDS
T08650
Name
(RefSeq) E3 ubiquitin protein ligase RIN2
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127333692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127333692
Enzymes [BR:
lper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
127333692
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127333692
Multi subunit type E3
ERAD complex
127333692
LMBR1L-GP78-UBAC2 complex
127333692
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUE
zf-RING_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_5
E3_UbLigase_EDD
Motif
Other DBs
NCBI-GeneID:
127333692
NCBI-ProteinID:
XP_051216053
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Position
2:107852045..107861319
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AA seq
564 aa
AA seq
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MAVNCLYVAAASTAASAAALQWWAASLLDGDPAAAAGDSLHTLLRSHVTVALLANLAAHL
FLLIVLALKTLFFVQLTSSETRKVLEHIINYVIYKGTFLPLVVPPNSQQIILWSTWLVLL
CSLKMFQSLARERLERLNASPSATPSKYLRVYSALLFVLSTDLLWMKLCVGFCRACNSKL
FWLMFFEPLSIAFESLQSIMVHGFQLVDIWQRHLMDSGVDYLDFQKTYKQAAGSFSEWRG
KVIRNFGFVIDLMSLLMSLGHYSMIFWLRGMAFHLIDAVLILNLRALVISFLKRIKTYIK
LRKALRSLDGALPDATYDEICTYDDECAICRGPMARAKKLSCNHLFHLPCLRSWLDQGLM
EGYSCPTCRRPLFLSSQGHTRSATTEVANVQLIAEQLNMGLNQQRVPGHEHPVEQQNPSD
AVWRGAGLDSSWAPPWSSPGMDDPSSSSAVRSVGLTGVQMMMRQFASVSDNYGRTDATWN
LWPDAMAGPSIVPASSSRPDGASAAGLRFRGATAGTINGSTSQINSMVDRVREVLPHMPD
ELILEDLMRTNNVNATVNNLLLMQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaactgcctctacgtcgccgccgcctccacggccgcaagcgccgccgcgctg
cagtggtgggcagcctccctcctcgacggggatcccgccgccgcagccggggactcgctc
cacaccctgctgcgctcgcacgtcaccgtcgcgctgctagcgaatctcgccgcgcacctc
ttcctactcatcgtcctagccctcaagactttattttttgttcagttaacttcttcagag
actagaaaagtgctggaacacatcattaactatgtaatttataagggaacttttctccca
ttggttgtgcctcctaattctcaacaaataatcctttggtcaacttggttggtccttctt
tgttcactgaagatgttccaatcattggccagagaacgtcttgagcgcctcaatgcgtca
ccctcagcaactccatcaaaatatcttcgtgtatattctgcattgttgtttgttctttcg
actgatctactatggatgaagctttgtgtagggttctgcagggcatgcaattctaagtta
ttttggcttatgttctttgagccacttagtattgcctttgagtcattgcagtctatcatg
gtgcatggatttcagttggttgacatttggcagcgacatctgatggacagtggtgtggac
tatctggatttccagaagacttataaacaagcagcaggatccttttctgagtggagaggc
aaagttatcaggaattttggtttcgtcattgacttgatgagcttgttgatgtcacttggt
cattattcgatgatcttttggctccgtggtatggcgtttcacctgattgatgcagttctc
atattgaacttgcgtgctcttgtaatttcatttttgaaaaggatcaagacgtacatcaag
ttaagaaaggcgcttcgttcgctggatggagcacttccagatgctacatatgatgaaatc
tgcacatatgatgatgagtgtgccatctgccggggaccaatggctcgagctaaaaagttg
tcctgcaaccatctatttcatctaccttgcttgcgatcttggttggatcaaggattaatg
gagggttactcttgtccaacttgtcgaaggccactctttctttcatctcaaggacatact
aggtctgcaacgacagaggtagcaaacgttcagctaattgcggaacagctaaatatgggg
ttaaatcagcagagggttcctggtcatgaacatcctgttgaacagcagaatccttcagat
gctgtttggagaggtgctggtcttgattctagctgggcaccaccctggtcgagccctgga
atggatgatcccagttcctccagtgcagtgagatctgtggggcttaccggagttcagatg
atgatgagacagtttgcttctgtgagtgataattatgggcgtacagatgccacctggaat
ctatggcccgatgcaatggctggtccttcaattgttccagcgtcttcctcgaggcctgat
ggtgcttctgctgctggcttgcggttccgaggagctactgcaggaacaattaatggaagc
acgtcgcaaattaattccatggtagatagagtacgcgaggttttaccccacatgcctgat
gagctaattctggaggatctgatgagaactaataacgtgaatgccactgtgaataatctt
ctgctgatgcagtga
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