Lolium perenne (perennial ryegrass): 127333869
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Entry
127333869 CDS
T08650
Name
(RefSeq) histone deacetylase 15
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lper01009
]
127333869
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127333869
04131 Membrane trafficking [BR:
lper04131
]
127333869
03036 Chromosome and associated proteins [BR:
lper03036
]
127333869
Enzymes [BR:
lper01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127333869
Protein phosphatases and associated proteins [BR:
lper01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127333869
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127333869
Membrane trafficking [BR:
lper04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
127333869
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
127333869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
NapB
Motif
Other DBs
NCBI-GeneID:
127333869
NCBI-ProteinID:
XP_051216267
LinkDB
All DBs
Position
2:164323560..164334865
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AA seq
606 aa
AA seq
DB search
MRPPNSKKCEVPSHGGQNGGDQAFHGKCQSCDGVEKPSHSRENGVSLKEHRGTGSFNGDH
TDALSVDGAKGSLARSGHVDSAGCGHDGCLHGNNGSCMACDDQESDREQGGHTLDDLFFF
NDEEEDDIDWEPSARRVENRWFCLNCTVPNLDEVTHCQNCHELKGSEVAGYDDFKTQISQ
TALVSADTASQLVSTAIGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPSKC
ALVPPREITKEELIRVHTSDHVESIEQTKNMLYSYFTSDTYANGHSACAAKLAAGLCADL
ASLILSGRVRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAAKKAGAKKVLIVDWDVH
HGNGTQEIFEGDKSVLYVSLHRHEDGSFYPGTGAAHEVGVLAGEGFSVNIPWSCGGVGDN
DYIFAFEHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACSEGK
LLVILEGGYNLRSISSSATEVVKVLLGDSPSHSTDAAAPSNEGMQTVLQVLEIQQKYWPV
LVPIFASLQALQERSSSKYVNGENKLKRKMLAAGPGPVWWKWGSKRLLYEVLFEGFGPRK
SKTKGK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagacctcctaacagcaaaaagtgcgaggtgccttcacatggcggtcagaatggtgga
gaccaagcttttcatggcaaatgtcaaagctgcgatggtgttgaaaaaccatctcattct
agagagaatggcgtttccttgaaagaacaccgtggaacaggcagttttaatggtgatcat
actgatgctttatcagtagatggggcgaaaggttctctcgcaagatcaggacatgttgac
agtgcaggttgtggtcatgatggctgtcttcatggcaataatggtagttgcatggcctgc
gatgatcaagagtctgatagagaacaaggtggacataccctggatgatctgttcttcttt
aacgatgaagaggaggatgatattgactgggaaccttctgctcgccgtgttgagaacaga
tggttttgcttgaactgtacagtaccaaacttggatgaggttacacattgccagaattgc
catgagcttaagggatctgaggtagctggatatgatgatttcaaaactcaaatttcacag
acagctttggtatctgctgatacagcatcacaactggtatctacagccattggctttgac
gaaagaatgttactccacagtgagatcgaaattaaaccaaatccacatccagaaaggcct
gatcgtctccgtgcaattgctgctagtcttgctgctgcaggaatatttccttcaaaatgc
gccttagtacctcctcgagaaatcactaaggaggaactcataagggtccatacttcagat
catgttgaaagcatcgagcagaccaagaacatgctttacagttacttcacttcggatact
tacgcaaatggacactcagcatgtgctgcgaaacttgcagcaggtctatgtgctgatctt
gctagtttgatactgtctgggcgtgtccgcaatggctttgcactggtgagacctcctggg
catcatgctggggtaaagcaagccatgggtttttgtcttcacaacaatgcagcagtggct
gcattagctgcaaaaaaagcgggtgccaagaaagtgttgatagttgactgggatgtgcac
catggaaatggcacacaggagatatttgaaggggacaaatcagttctgtatgtatcatta
catcgccatgaggatggaagcttctaccctggaactggagcagcacatgaggtgggagtt
ctagctggtgaaggattctcggtcaatataccttggagctgtggaggtgttggagacaat
gactacatctttgcttttgagcatgtggtgcttccaattgctgcagaatttgccccagac
atcaccattatatctgcaggatttgatgcagcaaggggtgatcctctgggctgttgcgat
gtcactcctgccggttactctcggatggcgtccatgctaactgcttgttcagaaggaaaa
ttgttggttatactcgagggaggatacaatcttcggtctatatcctcatcggctactgaa
gttgtcaaggtcctacttggggatagtccaagtcatagtacagatgcagctgcaccatca
aatgagggcatgcagactgtcttacaagttctggagatccagcaaaagtattggccagtt
ttggttccaatctttgcatcactccaggcattgcaggagcggagttcttccaaatatgtt
aatggggaaaacaagctgaagagaaagatgcttgcagcaggaccagggcccgtgtggtgg
aaatggggaagcaagaggcttttgtacgaagttctgtttgagggattcggtccaagaaag
agcaagaccaaaggaaaatga
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