Lolium perenne (perennial ryegrass): 127334345
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Entry
127334345 CDS
T08650
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127334345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127334345
03036 Chromosome and associated proteins [BR:
lper03036
]
127334345
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127334345
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127334345
PBAF complex
127334345
GBAF(ncBAF) complex
127334345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
127334345
NCBI-ProteinID:
XP_051216749
LinkDB
All DBs
Position
2:204460942..204533832
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AA seq
516 aa
AA seq
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MATGGNPNPGQPRPQQPPPGGSPATPHTHMRPPSMAAAHYQGLFHSPPSHNPAFQIHMGA
SSTPQTPLMAAAAAAASAKRPPQKPPTRPPAPTSAAAAASVAAAYKAANSGSVDLTPAAR
RNKKRKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALARKKVDIQEALKTPPSLQRT
LRIYVFNTFANQARTIPPPKAAEPPTWSLKIIGRVLEDGAELDPAGVVPKHNPMYPKFSS
FFKRVTIGLDPSLYPENSMITWENARSAAPQEGFEVKRKGDKEFLANIRLEMNYNPEKFK
LSQPLMEVLGVEVDTRARVIAALWQYIKAKKLQNPSDPSYFMCDPQLKKVFGEEKMRFAM
LSQKISQHLAPPPPINFEHKIKLSGNGANSSACYDILVDVPFPLQKEMTAFLANTEKHKD
IEACDEVISASIKKIHEHRRRRAFFLGFSQSPVEFINALIASQSKDLKLVAGEANRNIER
ERRADFYNQPWVEDAVIRYLNRKPPGGNDGPGAGGS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggccaccggcggcaaccccaaccccggccagccacgcccgcagcagccgcctccgggg
ggctctccggcgaccccgcacacccacatgcgccccccatccatggccgccgcccactac
cagggcctcttccactccccgcctagccacaaccccgctttccagattcacatgggcgcg
tcctccacccctcagacccctctaatggcggcggcggccgccgccgcctcggccaagcgc
cccccgcagaagccccctacgcgtcccccggcgcccacctccgccgccgccgcagcgtcc
gtggctgccgcttacaaggccgccaactccggcagcgtcgacctcacccccgccgcgcgc
cgcaacaagaagcgcaagctcccggagaagcagctccccgaccgcgtcgcggcgctgttg
ccggagtccgcgctctacacgcagctcctcgagttcgaggcgcgcgtggacgcagcgctc
gcccgcaagaaggtggacatccaggaggcgctcaagacgccgccgtccctccagcgcacg
ctccgcatctacgtcttcaacaccttcgccaaccaggcgcgtaccatcccgccgcccaag
gccgccgagccgcccacctggtcgctcaagatcatcggccgcgtgcttgaggacggcgca
gagctggacccagccggtgttgtacccaagcacaacccgatgtatcccaaattctcctcc
ttcttcaagagggtgaccattgggctggacccatcgctctatccggagaactcgatgatc
acttgggagaatgcgcggtctgctgcgccgcaggaagggttcgaggtgaagcggaaaggg
gacaaggagttcctcgcgaatatacggctggagatgaactacaaccccgagaagttcaag
ctgtcgcagccactgatggaggtgcttggggttgaggtggacactcgggcgagggtcatc
gctgccctttggcagtacatcaaggcaaagaagctgcagaatccgagtgatccttcctac
ttcatgtgcgaccctcagttgaagaaggtatttggggaggagaagatgaggttcgcgatg
ctgtcgcagaagatatcgcagcatcttgcacctccaccgcccatcaattttgagcataag
atcaagctatcggggaatggagcaaactctagtgcttgctatgatatattggtagatgtt
cctttcccgctgcagaaggagatgacagcattccttgccaataccgagaagcacaaggac
atcgaggcatgtgatgaggtgatatctgcttctatcaagaagatccatgagcatcgtagg
aggagggcattctttcttgggttcagccagtcccctgtggagttcatcaatgcgttgata
gcatcccagagtaaagatttgaagcttgttgctggtgaagcgaataggaatattgaacgg
gaaagacgtgcagacttttacaaccaaccatgggttgaggatgctgttataagatatttg
aaccgtaaaccgcctggcggcaatgatggcccaggtgcgggtggttcttga
DBGET
integrated database retrieval system
