Lolium perenne (perennial ryegrass): 127334537
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Entry
127334537 CDS
T08650
Name
(RefSeq) exosome complex component RRP45A isoform X1
KO
K03678
exosome complex component RRP45
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127334537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127334537
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127334537
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
G_glu_transpept
Motif
Other DBs
NCBI-GeneID:
127334537
NCBI-ProteinID:
XP_051216982
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All DBs
Position
6:complement(131147158..131150842)
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AA seq
446 aa
AA seq
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MMDQRWRPTVNEREFIEHALQSDLRIDGRRPFDFRKLKIAFGREDGSAEVELGETRVMGY
VTAQLVQPYKDRPNEGTLAIFTEFSPMADPAFEPGRPGEAAIELGRVIDRGLRESRAVDM
ESLCVVAGKHVWSVRVDLHILDNGGNLIDAANIAALAALCTFRRPECTVGGDDGQQVTVH
DPEVRDPLPLAIHHLPIAVTFAYFGDGNIMVLDPTYKEEAVMGGRMTATINSNGDVCSIQ
KAGGEGVTSSVIMQCLRIASVKAADITSKIKSNVDEYTTEKAVRKVKRTPVLVAKKNDVP
DITMESNDGALESQTSKTPNDAQDTSKGDDDYRIKRISPLTGDRTVKPKQTSMFLGGPSN
WDPYSKGVSLSSLRISQLPDPPAKPNDKRHEDAKSRLSESNLDVESMPNSGIAGESDEAK
ESVSPKSLKDAVKPKHKRKKKQHGKS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccagcggtggcgcccgactgtgaacgagcgggagttcatcgagcacgccctc
cagtcggacctccgcatcgatggccgccgccccttcgacttccgcaagctcaagatcgcg
ttcggcagggaggatggctcggcggaggtggagctcggcgaaacgcgtgtgatgggttat
gttactgcccaattggtccagccgtacaaggacaggcctaacgaggggacgctggccata
ttcacggagttctcgcccatggctgatcctgcctttgagcctgggcgacctggggaagct
gcgattgagctgggccgtgtcatcgaccgtggcctaagggagagccgagctgtggatatg
gagtccctgtgtgttgttgctgggaagcacgtctggtcggtccgtgtcgaccttcacatt
ctcgacaatggggggaatctaattgatgcagctaacattgctgcactggcagctttgtgt
acattccggaggcctgaatgcacagttggtggggacgatggtcagcaagttacagtacat
gaccctgaggtcagagatcctcttccgctagcaatccatcaccttccgatagctgtaacc
tttgcatattttggtgatggtaatatcatggttcttgatccaacatacaaggaagaagct
gttatgggaggaagaatgacagccacaattaactccaatggtgatgtctgttccattcag
aaagctggtggagagggtgtcacgtcaagcgtcatcatgcagtgtttaaggattgcttcg
gttaaagctgctgatataacaagcaaaataaagagcaatgttgacgagtacaccactgag
aaggcagtgcggaaagtaaagcgtactccagtcttggtggctaagaaaaatgatgttcct
gatataactatggagagcaacgacggtgcattggaaagccaaacctcaaagacacccaat
gatgctcaggacacaagcaaaggtgatgatgattatcgtataaaaaggatttcacccttg
actggggaccgaactgttaaacccaaacaaacatccatgttccttggtggcccatcaaat
tgggatccatactccaaaggagtttccttaagctccctcagaatctctcagttgccggat
ccaccagctaaaccaaatgacaagaggcatgaggatgccaaatcaaggttaagtgaatct
aatctggacgtggaaagcatgccaaattctggaatcgctggagagtcagatgaggccaag
gaaagtgtatcaccgaagagtctaaaggatgctgtcaaaccaaaacataaaaggaagaaa
aaacaacatggaaagagttag
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