Lolium perenne (perennial ryegrass): 127334655
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Entry
127334655 CDS
T08650
Name
(RefSeq) WD repeat-containing protein LWD1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127334655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127334655
03036 Chromosome and associated proteins [BR:
lper03036
]
127334655
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127334655
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
127334655
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
127334655
NCBI-ProteinID:
XP_051217133
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Position
6:122890430..122892174
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AA seq
419 aa
AA seq
DB search
MGGGGAAGDGDGWADQEQGNGGSRGGGEAKRSEIYTYEAAWHIYGMNWSVRRDKKYRLAI
ASLLEQYINRVEVVQLDESSGDIAPVLSFDHPFPPTKTMFVPDPQGLRPDLLATSADILR
IWRITDDDEAATAAADSSNGSVRCNGVGAPAAQQPGAKLCCELNGNRNSDFCGPLTSFDW
NDADPRRIGTSSIDTTCTIWDVEREAVDTQLIAHDKEVYDIAWGGAGVFASVSADGSVRV
FDLRDKEHSTIIYESSSGGAGSNSAAAAADGGAVSPTPLVRLGWNKQDPRYMATIIMDSP
KVVVLDIRYPTLPVVELHRHHAPVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGTGNNS
GGNGNGNASAAAAAAAAEGGLDPILAYTAGAEVEQLQWSATQPDWVAIAFANKLQILRV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcggcggcgcagccggggacggcgacgggtgggcggatcaggagcagggcaac
ggcgggagccgcggcggcggggaggcgaagcggtcggagatctacacctacgaggccgct
tggcacatctacggcatgaactggagcgtgcggcgcgacaagaagtaccgcctcgccatc
gccagcctgctcgagcagtacatcaaccgcgtcgaggttgtccagctcgatgagtcctcc
ggcgacatcgctcccgtcctctccttcgaccaccctttccctcccaccaagaccatgttc
gtgccggacccgcaaggcctccgccccgatctgctcgccacctccgccgacatcctccgc
atctggcgcatcaccgacgacgacgaagctgccaccgccgccgccgactccagcaacggc
tccgtacgctgcaacggtgtaggcgcccccgctgcccagcagccgggcgccaagctctgc
tgcgagctcaacggcaaccgcaacagcgacttctgcggcccgctcacctccttcgactgg
aacgacgccgacccacgccgcattggaacatcgtccatcgatacaacatgtaccatctgg
gacgtcgagcgtgaggccgtcgacacccagctcattgcacatgacaaggaggtctatgac
attgcttggggtggcgccggtgtctttgcatctgtctctgctgatggctcggtacgtgtg
tttgatcttcgggataaggagcattcaacaatcatctatgagagcagttcaggtggtgct
ggctccaattctgctgctgctgctgccgatggtggggctgtgtcgcccacgccattggtt
aggctggggtggaacaagcaggacccgaggtacatggccaccatcatcatggatagcccc
aaggtggttgtgcttgacattcgctacccaacactgcctgtcgttgagctccaccgccac
catgctcctgtcaatgctatcgcatgggcgcctcactcttcttgccacatttgcacagcg
ggagatgactcacaggcactcatatgggacctatcatccatgggcaccgggaacaatagc
ggtggcaatggaaatggcaatgcttctgctgctgctgcagcagcagcagcagagggtggt
cttgaccctatactggcttacacggcaggggccgaggttgagcagctgcagtggtcagca
acccaacctgactgggttgccattgcatttgccaataaactgcagattctcagggtctga
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