Lolium perenne (perennial ryegrass): 127334981
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Entry
127334981 CDS
T08650
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127334981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127334981
03110 Chaperones and folding catalysts [BR:
lper03110
]
127334981
03029 Mitochondrial biogenesis [BR:
lper03029
]
127334981
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lper04147
]
127334981
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
127334981
Messenger RNA biogenesis [BR:
lper03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
127334981
Chaperones and folding catalysts [BR:
lper03110
]
Heat shock proteins
HSP60 / Chaperonin
127334981
Mitochondrial biogenesis [BR:
lper03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
127334981
Exosome [BR:
lper04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127334981
Exosomal proteins of other body fluids (saliva and urine)
127334981
Exosomal proteins of breast cancer cells
127334981
Exosomal proteins of colorectal cancer cells
127334981
Exosomal proteins of bladder cancer cells
127334981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
127334981
NCBI-ProteinID:
XP_051217510
LinkDB
All DBs
Position
2:complement(221791455..221795914)
Genome browser
AA seq
640 aa
AA seq
DB search
MQLCIRGLHPPSFLPTAAAAALSSSSPQPLTSAQSQRSSMSRMPLPPPSPPPSLSSKGPT
LPFSPKKSPPMPVYKDLHFNRDLSATKKLQVGVDLVARLVGVTLGPKGRNVVLGNKYGPP
KIVNDGETVLKEIELEDPLENLGVKLVRQAGARTNDIAGDGCTTSIILAQGLIAEGMKVL
AAGMNPVQIARGIGKTSDALVSELKLMSREIEDHEIVHVAAVSAGNDYTVGNMISDAFKR
VGREGMVRIENGRGIENSLEIVEGMQFERGYLSPYFVTNHASMSTEFTDCKILLVDKIIS
DPRELLRVCFSAVKEDFPLLIIAEDVEEEALATLTRNKLSGMIKVAATKAPSFGEQKTQC
LEDIAIITGGTVVREDMGYTLEEAGKEVLGFASKVVIKNDSTLIVTDGSTLHAVEKRVAQ
MKGQIENSKERYQKKILGERIARLCGAIAIIQVGAQTVIELKDKKLRIEDALNATMAAIE
EGVVVGGGCSLLRLSKKIDIIKESLDNAEQKIGADIFKNALSYPTTLIANNAGMSGKFVV
EKVIDRVSSYFGSVLSNDNISYGYNAANGSYEDLMAAGILDPTKVVRCCIEHAAVVAKSF
LTSDVVIVEAQESKPVRVRPPMPPRNLIPPIPASVSGIRV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgtgcatccgcggccttcatcctccttccttccttccaacagcagcagcagca
gccttatcatcgtcttcaccccaacctctcacctctgctcagagtcagagaagcagcatg
tcaaggatgccgcttcctcctccttctcctcctccctccctctccagcaagggccctacc
ctgcccttctcccccaagaagtccccgccgatgcccgtgtacaaggacctccacttcaac
cgcgacctctctgccaccaagaagttgcaggtaggcgtggacttggtggcgcggctggtc
ggggtgaccctggggcccaaggggaggaatgtggtgctcggcaacaagtatggccctccc
aagatcgtcaacgatggggagacggtcctcaaggagatcgaattggaggacccgttggaa
aatctaggagttaaattggtcaggcaggccggcgccaggacgaatgatattgctggtgat
ggctgtaccacttctataatccttgctcaaggcctgattgctgaaggaatgaaggttctt
gctgctggcatgaatccggtccagatcgcccgtggcattgggaagacttctgatgcttta
gtttctgaacttaagttgatgtcacgggagatcgaagaccatgaaatagtgcacgtggcc
gcagttagcgctggaaatgattacactgttggaaacatgatttcggatgctttcaaaaga
gtgggcagggaaggcatggttagaattgaaaatggaagaggcattgaaaatagtttagag
attgtcgaaggaatgcaatttgaacgtggttacctctcaccttactttgtgactaatcat
gcgagtatgtccacggagttcactgactgtaagatcctgttggttgacaagataatttct
gatccacgggagctcttaagagtatgctttagtgctgtaaaggaagattttccattgtta
ataattgccgaggacgtcgaagaagaagcattggctactttgaccagaaacaagctatcc
ggtatgatcaaagtggctgcaactaaggccccttcttttggagaacagaaaacccaatgt
ttggaggacattgcaatcataacaggaggtacagtagtgagagaagacatgggatacaca
ctagaagaagcagggaaagaggttttaggttttgcttctaaagtggtaataaaaaatgat
tcaacgctgattgttactgatggaagcaccctccatgcagttgagaaaagggttgctcag
atgaaaggccaaattgagaactcaaaggagaggtaccagaaaaagatactgggtgagagg
attgcaaggctatgtggtgcgattgcaatcattcaggtcggtgctcaaacagtcattgag
ctcaaagataagaagctgagaattgaagatgcccttaacgcaaccatggcagctattgag
gaaggtgttgtagttggtggtggatgtagcctattgagattatccaagaagattgacata
atcaaggaatcattggataatgcggagcagaagattggtgctgacatcttcaaaaatgcc
ctgagctaccctaccacactaatagcaaacaatgctggtatgagtgggaagtttgttgtc
gaaaaggttatcgatcgcgtcagtagctatttcggttcagtactttcgaatgacaatata
agttatggctacaatgctgccaatggctcctacgaggacttgatggctgctggaatatta
gacccaacaaaggttgtgaggtgttgcatagagcatgctgctgttgttgccaagtctttt
ctgacctcagatgtggtgatcgttgaggcacaagagagcaaaccggttcgtgtaaggccc
ccaatgccccctaggaacctgattcccccaatacctgcatcagtttcaggtattcgagtg
tag
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