Lolium perenne (perennial ryegrass): 127335001
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Entry
127335001 CDS
T08650
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127335001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127335001
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127335001
mRNA degradation factors
5'-3' decay
Lsm complex
127335001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
127335001
NCBI-ProteinID:
XP_051217535
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All DBs
Position
2:222621881..222625189
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AA seq
128 aa
AA seq
DB search
MSWAGPDEILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEL
YCDVPLGLYVIRGENVVLIGELDLEKDELPSHMTCVSEAEIRTAEKAEKEARDLKGTMRK
RMEFLDFD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccgggcccgacgagatcctcctctccacctccctagccggcttcttggac
aagaaacttattgtcctactacgagatggaagaaagctgcttggcaccctctgctcattt
gatcagttcgcgaatgttgttcttcagggtgcttgtgaacgagtaattgtaggcgaacta
tattgtgatgtccctcttggactatatgtgatccggggagagaatgttgtattaatcgga
gaattggatcttgagaaggatgaactccctagtcacatgacctgtgtttcggaggctgaa
ataagaacggctgagaaagcagaaaaggaagcaagagatctgaaaggcacaatgagaaaa
aggatggagttcctcgatttcgattaa
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