Lolium perenne (perennial ryegrass): 127335270
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Entry
127335270 CDS
T08650
Name
(RefSeq) SWI/SNF complex subunit SWI3A homolog
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127335270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127335270
03036 Chromosome and associated proteins [BR:
lper03036
]
127335270
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127335270
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127335270
PBAF complex
127335270
GBAF(ncBAF) complex
127335270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Acid_phosphat_B
Lipocalin_5
Motif
Other DBs
NCBI-GeneID:
127335270
NCBI-ProteinID:
XP_051217851
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All DBs
Position
2:235235632..235241934
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AA seq
556 aa
AA seq
DB search
MSPAAASGEAPPPPRPARELYTIPASSSWFRWDDIHDLERRALPDFFGGAGGSGVGTASR
NPRIYREYRDYIISKYREDPARRLTFTEVRRALVGDASLLRKLFGFLDSHGLINFSATSP
RPAAAPRPGVGADAVLEPPLGLQVTPRPPPSFLEERLGGGEGVFRLPQLTSYSDVFGEWA
PGKAPICGFCGEECRDGKVETLKDGFKVCSKCCKTNSDSKEESNKFSDVKQENSDNHASS
AWTDAETLLLLEGVLKHGDDWDLIAQHVRTKNKSECIARLIQLPFGEHMLGTINGKPDSR
FQANQTTDGKTNHCIVKEASSQSTEVVDGMQIDGEEDGADKLVEEHPSKRRRLCSSIDAT
GSLMEQLALLTTAVSPDVVAAAAAASIKALGDENPQAKKAFHLSEKEYQGKSFPSNRVQE
SNCNVGDQEVEMHGKTVSDKKMEKKFISTAYQVRAAVGTAVGVAAARAKMLADQEEREME
LLMASIIETQLRKIQYKIKHFEELELIMDQEYTTIQEIKESLIKDWLKVLKRAFETGAPI
QRDEVLTKLFLSKSAP
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggcggccgcctccggcgaggcgccgccgccgccgcgcccggcgcgcgagctc
tacaccatcccggcctcctcaagttggttccgctgggacgacatccacgacttggagcgg
cgggcgctgccggacttcttcggcggcgcgggcggcagcggcgtcgggacggcctcgcgg
aacccgcggatctaccgcgagtaccgcgactacatcatcagcaagtaccgggaggacccg
gcgcgccgcctcaccttcaccgaggtgcgcagggcgctcgtcggcgacgcctcgctcctc
cgcaagctcttcggcttcctcgactcccacggcctcatcaacttctccgccacctccccc
cgccccgccgccgcgccgcggcccggggtcggggcggacgccgtcttagagccgcccctg
gggctgcaggtcacgccgcgcccgccgccctccttcctggaggagaggctcggtggaggg
gagggcgtgttccgcttgcctcagctcacctcctacagcgacgtgttcggggagtgggcg
cctgggaaggcgcctatatgcggcttctgcggcgaggagtgccgggatgggaaggtggag
acgttgaaggatggttttaaagtatgttcgaagtgttgcaaaaccaatagtgatagtaag
gaggaatcaaataaattctctgatgttaaacaggagaactctgacaaccatgcttctagt
gcatggacagatgcagagacactactccttttagaaggtgtcctaaaacatggagatgac
tgggatctcattgcccagcatgtccgcacaaagaataaatcggaatgcattgctaggctt
attcagttgccttttggtgaacatatgctgggtaccataaatggtaaacctgatagtagg
ttccaggcgaaccaaacaactgatggcaaaacgaaccactgcattgtgaaggaggcttca
agtcagtcaaccgaagtggttgatggcatgcagattgatggagaggaagatggtgctgat
aaattagttgaagaacatccttcgaagcgtcgacgtttatgttcttcaatagatgccact
ggttcattaatggagcagttagcactgctgactacagcagtgagcccagatgttgttgca
gcagcagctgctgcatcaattaaagcattgggggatgaaaacccccaagcaaagaaagct
tttcatcttagcgagaaagaataccaaggcaaatcattcccttctaaccgtgtccaagag
agtaattgcaatgttggcgatcaggaagtggaaatgcatggaaaaactgtttctgataag
aaaatggaaaagaagttcatttctaccgcatatcaagtaagggcagctgttggaacagct
gttggtgtagctgctgcccgtgctaagatgcttgcggaccaggaagagcgagagatggag
cttttaatggcgtccataattgaaactcagctaagaaagatccagtacaagatcaaacac
tttgaggagctagaactgatcatggatcaggagtacaccacaatacaggaaataaaggaa
tccctcatcaaggattggctaaaggtcctcaagcgagcatttgagactggagcgcctatc
cagagggatgaagtgctcacaaagctgttccttagcaagtctgctccatag
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