Lolium perenne (perennial ryegrass): 127335572
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Entry
127335572 CDS
T08650
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127335572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127335572
04121 Ubiquitin system [BR:
lper04121
]
127335572
03036 Chromosome and associated proteins [BR:
lper03036
]
127335572
03400 DNA repair and recombination proteins [BR:
lper03400
]
127335572
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
127335572
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127335572
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
127335572
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
127335572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_3
zf-HC5HC2H_2
zf-RING_UBOX
RTT107_BRCT_5
zf-RING_5
zf-C3HC4
PTCB-BRCT
zf-C3HC4_4
zf-C3HC4_2
zf-RING_10
zf-RING_6
PHD_NSD
zf-RING_2
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
127335572
NCBI-ProteinID:
XP_071682725
LinkDB
All DBs
Position
2:complement(250261853..250267086)
Genome browser
AA seq
635 aa
AA seq
DB search
MASSMRRFLNPLVLNIQKMELELTCPVCLKLLSAPTMLPCSHTSCSTCATAQTMEGYSCA
ICKLPYNSQDLKPAYNLEAIVKIHKSLSSTLSSMVTQQGAQGDIPVASQQTPVRGNKNSY
NSVASKLLYGQSTEPVKAVVGGQKAMDPALNQSNGVAVQPTVLVHKGPCRSSQSSDGTRD
LDCDSNDLEGELVASRSPPQNESKRVPDVMDDHTREPKSTYFLLTHFTGYFGMEGKXTDI
IANINAEQRTMNDSWKCEFCHSPEISKCAGPLLHYLNGEPVKDDQAWKSNVLHVHEKCTE
WAPQAFFDGDIVKNLENELARSLKIKCSVCGLKGAALGCLVRSCRQSFHFPCAHGIPGCR
WDEEKFVMLCPSHSSKKLPCEKPKSKKKAQLQQSSSDAILGDLNSPFPMERNEIWTASPF
LSNEWVICGSALSGRDKEVLGQFQSQTGITVTNNWTPNVTHVVANTDEKGACGRTLKVLL
AILAGKWVLNVNWLKACLEAREPVPEEPYEISSDVHGSVDGPRTGRLRAIQKAPRLFSGL
AFYFIGDVLPMFMADLENLIAMAGGSILDKADLSSTSLILYNMEVPPGDDQANIELVMEK
RRAEAEELAATVGCRALAHTWVLDSIAFCKVEFPM
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagcatgaggaggttcctcaacccgctggtgctcaacatccagaagatggag
ctcgagctcacctgccccgtctgcctgaagttgctcagcgcgcctacgatgctaccatgt
tcccacacgtcctgcagcacctgtgccaccgcacagaccatggaaggctacagctgcgcc
atctgcaaactgccctacaactctcaagatttaaagcctgcttataaccttgaggcaata
gtgaaaatccacaagagcctcagctctacgctcagcagcatggtcacacagcagggggct
caaggggacattcctgttgcatctcaacaaactccagtacgggggaacaaaaattcttac
aactctgttgcttcaaagctgctgtatggccaatcaacagaacctgtaaaagcagtcgtg
ggcggtcagaaagcaatggatcctgcattgaaccaatctaatggtgtggctgttcagcca
acggttcttgtacacaagggaccatgcaggtcgtctcaatcttccgatggcactagggat
ctggactgtgacagtaatgacctggaaggagagttggtagcaagcagatcccctcctcaa
aatgagtcgaaaagagtacctgatgtaatggatgaccatactagggaaccgaagagtacg
tattttctcttaactcatttcactggatattttggaatggaaggcaaataaactgacata
attgcaaacatcaatgcagaacaacgaactatgaatgactcctggaaatgtgaattttgt
cactctcctgaaatcagcaagtgtgctggcccgttgttgcactatctgaatggagaacca
gtgaaggatgatcaagcttggaaatctaatgttctgcatgtccatgagaaatgcactgaa
tgggctcctcaagcattctttgatggtgatattgtgaagaatttggagaatgagttggcg
cgttctttgaagatcaagtgcagtgtttgtggattaaaaggtgcagcactaggctgcctt
gttaggagctgccgccaaagctttcatttcccatgtgcccatgggatcccaggctgccga
tgggacgaagaaaagtttgttatgctgtgtccttcccattcatcaaagaagctgccctgt
gagaaaccaaaatcgaaaaagaaggcccagcttcaacaatcatcttctgatgctattctt
ggcgatttgaactcaccttttccaatggaaagaaatgaaatttggacagcctcacctttt
ttatcaaatgaatgggtgatatgcggatctgccctctctggccgagacaaggaagtgttg
ggtcagttccagtctcaaactggcatcacagtaactaataactggacgccaaatgtgact
catgtagttgctaatacggatgaaaagggtgcatgtggtaggacactgaaggttctcctg
gccatactagctgggaaatgggttctcaatgtaaattggctgaaagcttgcctggaggct
agagaaccagtccctgaggagccatatgagatcagttctgatgttcatggctctgttgac
ggccctcgcacaggaagactacgagcaatccaaaaggcaccaagactgttttcagggctg
gccttctactttattggtgatgtcctgccgatgtttatggcggaccttgaaaacttgatt
gccatggcaggaggatctatcttggacaaggctgatctctccagcacatccttgattctt
tacaacatggaggttcctcctggagatgatcaggccaacatcgagctggtaatggagaag
agaagggccgaggctgaagaactggcagcaacagttggctgcagggctcttgctcataca
tgggttctagatagcatcgccttctgcaaagtggagtttcccatgtga
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