Lolium perenne (perennial ryegrass): 127336208
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Entry
127336208 CDS
T08650
Name
(RefSeq) uncharacterized protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127336208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127336208
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127336208
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
Roquin_1_2-like_ROQ
Motif
Other DBs
NCBI-GeneID:
127336208
NCBI-ProteinID:
XP_051218964
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All DBs
Position
2:complement(294239721..294243093)
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AA seq
324 aa
AA seq
DB search
MANLQPSLPVPPSFAGASPPSPSPIGGAQEPNDRKLASAEQLVLDLCDRDLRENALLELS
KKREIFQDLAPLLWHSFGTIAALLQEIVSIYPALSPPTLSPGASNRVCNALALLQCVASH
PDTRIPFLHAHVPLFLYPFLNTFSKTRPFEYLRLTSLGVIGALVKVDDTEVIGFLLQTEI
IPLCLRTMEMGSELSKTVATFIVQKILLDDIGLRYVCATAERFYAVGSVLGNMVISLADQ
PSTRLLKHIIRCYLRLSDNPRACVALHNCLPDMLKDGTFNISLRDDPATRRWLQQLLHNV
TVGGMGGPGMGGPPQPGLDHMMGI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctgcagccttccctccccgtgccgccctccttcgcgggggcgtcgccgccg
tccccctccccgatcggcggcgcgcaggaacccaacgacaggaagttggcgtcggcggag
cagctggtgctcgacctctgcgaccgcgacctgcgcgagaacgccctcctcgagctgtct
aagaaacgggagatatttcaagacctggcccctctcctgtggcactcctttggcacaatc
gctgctctgcttcaggaaattgtgtcaatctaccctgcactttcacccccaactttgtcg
ccaggtgcatcaaaccgagtctgcaacgcacttgcacttcttcagtgtgttgcatcgcac
cctgataccagaatccctttcttacacgctcatgtgccactgttcttgtacccgttcttg
aatacattcagcaagacacgaccctttgagtacttgcgacttaccagcttgggtgtcatc
ggtgctcttgttaaggttgatgatactgaagttatcggttttctgctgcaaactgaaata
attcctctgtgcttgcgtaccatggagatgggcagtgagctgtcaaaaaccgtcgctacc
ttcattgtccaaaagattctgctggatgatattggactgcgttacgtctgtgctaccgct
gagcgtttctacgctgtgggcagcgttttaggaaacatggtaatatcacttgctgatcag
ccttccacaaggttgctcaagcacattatccgatgctacctcaggctgtcagataatccc
agggcctgtgttgcactgcacaattgcctcccagacatgctgaaagacgggacattcaat
atctctcttagggatgaccccgcgacaaggcgctggctccaacaactgctgcataatgtg
acagtgggtggcatgggaggacctggcatgggaggtcctccccagccaggcctggatcac
atgatggggatataa
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