Lolium perenne (perennial ryegrass): 127336382
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Entry
127336382 CDS
T08650
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127336382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127336382
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127336382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
127336382
NCBI-ProteinID:
XP_051219148
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All DBs
Position
2:285187535..285192636
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AA seq
680 aa
AA seq
DB search
MPRKVVSGPDYDDDEYDYEDYEDDYDDYEEVEQVDVKPLVKEKESLKKSSNAVPVLWKCS
MCTFDNHETMMYCEMCGVFRESFVKSAKDAPIKVESVNGISNNYGTSALSNSDSTKTPVK
TLTTKFDGDSEGKYASTSRDKVNSAPLASVGSSSGTGKKKQPIKLPEDVPVERTTRLIPD
HFQLKEDQSSRASSSAQNKDYMQTLSSDIGQLTTERNNVNVAQPYLPEEYKPEEWMLADQ
ESGALSQLNLAIVGHVDSGKSTLSGRLLHLLGKISKRDMHKNEKEAKEKGKGSFAYAWAM
DESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDAST
GSFEAGMDGEGGKNVGQTKEHAQLIRSFGVEQLIVAVNKMDVIGYSKERLEFIKVQLGSF
LRACNFRDSAITWIPLSAVENQNLAKPPSDARFTSWYQGLCLLDAIDSLQLPSRDVSKAL
ILPICDVIKSQSTGQLAAFGKLETGAIRNGSKVLVLPCGEVATVKTIERDSRSCSIARAG
DNVAICLQGVDGNRIIPGGILCHPGFPVPVANYLELKIRVLDITLPILLGHQVEFHIHHV
KEAARITKILALLDKTGKPSKAPPRFLKSKQSAVVQVTLDGAICVEEFSKCRALGRAFLR
ASGSTIAVGIVTKIMGQDQY
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaggttgtctctggtcccgactacgacgacgacgagtacgactatgaggat
tacgaggatgactatgatgattacgaagaggttgagcaagtcgatgttaagcccctggtg
aaggagaaagagtcactgaagaagtcctcaaacgcagtgcctgtgctttggaagtgctcc
atgtgcacatttgataatcatgaaactatgatgtactgtgagatgtgtggggttttccgg
gaatcttttgtcaaatctgccaaggatgctccgataaaagtagaatccgtcaatggaata
tcaaacaattatgggacatctgcattgtcgaactctgattctactaagacgccagtgaag
acgcttactacaaagtttgacggtgattccgagggaaagtatgctagcacatcacgtgat
aaagtcaattccgcaccattggcatctgttggtagctcatcaggcactggaaaaaagaag
caacctattaaacttcctgaagatgtgcctgtcgagaggacaactcgactgattcctgat
cattttcagttaaaggaggaccagagtagtagggctagcagttctgcgcagaataaggat
tatatgcagacactttcttctgacataggccagctaactacagaaaggaataatgtaaat
gttgcgcaaccttatttgcctgaagagtataagccggaggagtggatgctagctgatcag
gagtccggggcgctaagccaactaaatcttgcaatagtgggtcatgttgattctggtaag
tcaacactctctgggagattactacacctactaggaaagatatcgaaaagagatatgcac
aaaaatgagaaggaggctaaggaaaaaggaaagggttcatttgcttatgcatgggccatg
gatgagagcagtgaagaaagagaaagaggtgtcacaatgacagtggctgttgcttatttg
gaaaccaagaaataccgtgtagttttgcttgactctcctggccacaaagattttgtgcca
aatatgatatctggtgcaacacaagctgatgcagctattcttgtggttgatgcttcaact
ggttcttttgaagctggcatggatggtgaaggaggaaaaaatgttgggcagacaaaggag
catgctcagcttattagaagctttggtgttgaacagcttattgttgctgtcaacaagatg
gatgttatcgggtactcaaaagaaaggttggagttcatcaaggtacaacttggtagcttt
ctgcgggcatgcaacttcagagattcagctattacctggattcctcttagtgctgtagaa
aatcagaatttggctaaacctccttcagatgctcgttttacctcctggtatcaagggttg
tgtctcctggatgctatagattccctgcagcttccttctcgcgatgtttcaaaggccctc
attcttcctatatgtgatgttatcaagtctcagtcgacaggacagctggcagcttttgga
aaattggaaactggagctattcgaaatggttcaaaggtcttagttttaccttgtggggaa
gtggcgacagtgaaaaccattgaacgggactctaggtcatgcagcatagcaagggctggt
gacaatgtagcgatttgtctacagggtgttgatgggaatcgaataatacctggtgggatt
ctttgccaccctggtttcccggtacctgtagctaactacttggagctaaagattcgtgta
ttggacatcacccttcctattcttcttggtcatcaggtggagtttcacatacatcatgtg
aaggaagctgcaagaataacaaaaatcttggcattgcttgacaagacagggaagccaagt
aaagcaccaccacggtttcttaaatcaaagcagagtgctgttgtgcaggttacactagat
ggagcgatctgtgttgaggaattctccaaatgccgagctcttggaagggcattcttaagg
gcgtctggaagcacgattgctgttggtatagtaactaagataatggggcaggatcagtac
tag
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