Lolium perenne (perennial ryegrass): 127336579
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Entry
127336579 CDS
T08650
Name
(RefSeq) protein TORMOZ EMBRYO DEFECTIVE
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127336579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lper03009
]
127336579
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127336579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Utp13
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_IP5PC_F
Ge1_WD40
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
WD40_like
Cytochrom_D1
UTP15_C
Polysacc_lyase-like
Motif
Other DBs
NCBI-GeneID:
127336579
NCBI-ProteinID:
XP_051219369
LinkDB
All DBs
Position
2:complement(283048138..283054179)
Genome browser
AA seq
934 aa
AA seq
DB search
MALSMGPKKNYRCDRSLQQFYTGGPFAVGTAAPGGDAEAEAEAFLACACGSDLRVVSAAD
ASAIGDPIDGDSEAVTSLALSPDSRLLFAAGHSRLVRVWDLASRTCIRSWKGHDGPVMAM
ACHASGGLLATAGADKKVCVWDVDGGFCTHFFRGHTGVVTTIMFHKDPKRLLLFSGSDDG
DVRVWSLESKKCIAVLKAHLSTVTSLALSEDGQTLLSAGRDKVVTVWDLRKYSSKKTITA
YEMIEGVSFIGPGSGFLACLGVEPANLKEKANGYCLTVGERGVVRIWCLESAVCVFEQKS
SDVTINSENEESRRGFTATVMLPDDQGLLCVTADQEFLFYSCTRTDEGTFQLNLYKRLIG
YNDEILDLKFVGEEEQYLAVATNLEQVRVYDVASMSCSYVLAGHTEIVVCLDTCVSASGK
KLVVTGSKDNTVKLWDMEKRSCIGTGKGHLGAIGCVAFSKKSKNFFVSGSSDRTIKVWTW
DDALIDANGEVPLKAKAGVAAHDKDINSLSVSPDDGLVCSGSEDRTACIWKLPNLVSSVV
LKGHKRGIWSVEFSPVERCVITSSGDRTIKIWHVPDGSCLKTFEGHTSSVLRASFLSRGT
QFVSCGSDGLVKLWTIKTNECIATYDKHDGKVWALAIGRKTEMLATGGTDSDLNLWHDCT
LEDKQEDFLKKEEEVLRGQELENAVSDSDYTKAIQLAFELRRPRRLLELFSQLCRKADPE
DPIEKALHGLPKEGLRVLLEYIREWNTKPKFCHVAQFVLFRVLRSFPPTDIVEIKGISEL
LEGLIPYSQRHFSRVDRLVRSTFLLDYTLTRMSVVDPDVVDAGTTRDVTNDLSVENGEIL
PEEPAQESPEKPGKKRKSSKKGSNVVSVDTDVVDVGTARDVTNDSSVGNREILPEEPAQE
SPEKPGKKRKSSKSSKKGSKKVKTSSSNVVSVEA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcgatggggcccaagaagaactaccgctgcgaccgctcgctgcagcagttc
tacacgggcgggcccttcgccgtcgggaccgccgctcccggcggcgacgccgaggccgag
gccgaggccttcctcgcctgcgcctgcggcagcgacctgcgcgtggtgtccgccgccgac
gcctccgccatcggggaccccatcgacggcgactccgaggccgtcacttcgctcgccctc
tcccccgactcccgcctcctcttcgccgcgggacacagcaggctcgttagggtctgggac
ctcgcgtcacgcacttgcatccgaagctggaaggggcatgatggtcctgttatggccatg
gcatgccatgcttctggcgggttgcttgcgaccgctggagcagacaagaaggtgtgcgtg
tgggatgtagatggtggattttgcacccatttttttaggggccacacaggggttgtcacc
accataatgttccataaagatccaaagcgccttctgctattttcaggaagtgacgatggc
gatgtgcgagtttggagccttgaaagcaaaaaatgcattgctgtgcttaaggcgcatttg
tcaacagtcacttcgttggcattatccgaagatggccaaacattgctcagtgcagggagg
gataaggttgtgactgtgtgggatcttcggaagtatagctcaaagaagacaataacggct
tatgaaatgatagaaggtgtttccttcattggaccaggaagtggcttcctggcttgtctg
ggtgttgaaccggcaaatttgaaggaaaaagcaaatggttattgtcttacagttggtgaa
cgtggagttgtgcgcatatggtgcttggaaagcgctgtctgtgtatttgagcagaagtca
tccgatgtaaccatcaactcagagaatgaggaatcaagaagaggctttacagctactgtt
atgttgccagatgaccaaggattgctatgtgtcactgctgatcaagaatttttgttctat
tcttgtacgagaactgatgaaggaaccttccagttgaacctatataaacgtctaataggt
tataacgacgaaattcttgatttgaagtttgttggggaagaggaacagtaccttgctgta
gccactaacttagagcaggtccgtgtttatgatgttgcatcaatgtcatgttcttatgtg
ctggctggccacactgaaattgttgtttgccttgacacctgtgtctctgcttctgggaag
aaacttgttgtaactggaagcaaagataatactgtaaagttgtgggatatggaaaagaga
agctgcattggtaccggcaaaggccatctaggagctattggttgtgttgctttctcaaag
aaatcgaagaacttttttgttagtggcagcagcgaccgaaccatcaaggtttggacttgg
gatgatgcgctgattgatgccaacggtgaagttcctctcaaagcaaaggctggtgtagct
gcacatgataaagatattaattctctgtccgtctcacctgatgatggccttgtttgcagt
ggttctgaggaccgaacggcatgcatttggaaactcccaaacctagtgtcctctgttgtc
cttaaagggcataaaaggggcatttggtcagttgagttttctcctgttgaacgatgtgtc
ataacatcatctggtgacagaacaatcaaaatatggcatgttcctgacggctcatgcttg
aagacatttgagggtcatacatcaagtgttttgagagcatcattcctttcacgtggaact
cagtttgtttcttgtggaagtgatggtttagtgaagctatggacaataaaaacaaatgaa
tgcattgctacttatgacaagcatgatgggaaggtttgggcattggctattggtaggaaa
accgaaatgcttgctactggtggaactgattcagaccttaacctttggcacgattgcacg
ttggaagataagcaggaagatttccttaaaaaggaggaggaagtcttaagaggccaagaa
ttggaaaatgcagtatcagattctgactacacaaaagcaatacaactcgcatttgagctt
agaagaccgcgcaggcttcttgagttattctcacagctctgcaggaaagctgatccagag
gaccctatagaaaaagcccttcatggtctcccaaaggaagggcttcgcgtgcttctcgag
tatatacgtgaatggaatacaaagcccaagttttgtcatgttgcacagtttgtgcttttt
cgggtgttgaggagctttcctcccactgacatcgtggagataaaaggcatcagtgagcta
ctcgagggccttattccatactcgcaaaggcacttcagcagagttgataggctagtacgc
agcacatttttgttggactacaccttgacccggatgtctgtcgttgacccagatgtagta
gatgcgggcacaaccagagatgttacaaacgatttatcagtggagaatggtgaaatcctg
ccggaagagcctgcacaagagagccctgaaaagccgggcaagaaaagaaaatcaagcaag
aaaggtagcaacgttgtttctgtcgacacagatgtagtagatgtgggcacagccagagat
gttacaaacgattcatcagtggggaaccgtgaaattctgccggaagagcctgcacaagag
agccctgaaaagccgggcaagaaaagaaaatcaagcaaatcaagcaagaaaggtagtaag
aaggtgaagacttcttccagtaatgttgtttctgttgaggcttaa
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