Lolium perenne (perennial ryegrass): 127336634
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Entry
127336634 CDS
T08650
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127336634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127336634
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
127336634
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
127336634
NCBI-ProteinID:
XP_051219429
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All DBs
Position
2:complement(321402217..321405922)
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AA seq
203 aa
AA seq
DB search
MVGASSSSVVNVYPLANYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQ
EHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLCSKLAVNSPSFPPNWQVGECVA
VWWRPNFETVMYPYCPPHITKPKECKKLFIVHLTEREYFAVPRNLKLLAVPLFELYDNVQ
RYGPVISTIPQQLSRFQFNMVSS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgcctcgtcgtcgtcggtggtgaacgtgtacccgctcgccaactacacgttc
ggcaccaaggagcccaagatggagaaggacacctccgtcgccgaccgcctcgcccgcatg
aaggtcaactacatgaaggaaggaatgaggacaagtgttgaagcaatcctgttggtgcaa
gagcacaaccacccccacatactgctgttgcaaattgggaatacattttgcaagcttcct
ggtggacggttgaagcctggagaaaatgaaattgatggcctgaaaagaaagttgtgcagc
aaacttgcagtgaactcaccttcatttccacctaactggcaggttggtgagtgtgttgct
gtctggtggaggccaaactttgagacagtgatgtatccttactgccctccacatataacc
aagcccaaggagtgcaagaagcttttcattgttcacctgactgaaagggagtatttcgct
gttccaagaaacttgaagctacttgctgttccactgtttgaactttatgacaatgttcag
cggtacggacctgtcatttccaccattccgcagcagctgtctaggttccagttcaacatg
gtgagctcgtaa
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