Lolium perenne (perennial ryegrass): 127336883
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Entry
127336883 CDS
T08650
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127336883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lper03009
]
127336883
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
Pre-60S particles
RNases
127336883
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PID_4_5_C
Motif
Other DBs
NCBI-GeneID:
127336883
NCBI-ProteinID:
XP_051219705
LinkDB
All DBs
Position
2:complement(309407904..309411358)
Genome browser
AA seq
463 aa
AA seq
DB search
MGERLAGAEKEVLVEIVRFTQKNGLKGAEGGWKDFLALNDKKYGVSVSDPKKRTKDVLLS
FLVTFSKDFQKYFSKLVRRHTERRAIEQYMNEFSGKISPEQKLVQLTTEHTEYRKNYYFP
SYQEGWKIVRIGKLASSMNSGAMLAIDCEMVLCNDGTEAVVRVCVVDSKLEVKLDELVNP
LKAVADYRTNITGVSKKDLEGVKFSLVDVQKSLKKLLAKGKILVGHSLYRDLYVLKFDYS
RVIDTAYIFQYANLPTTASASLNSLCKSVCGYTLREEGKPHDCLKDAEAAMNLVTAKLKH
GFNDPIEIAENSVPESDQMKLLAHRIPVYLPSQELLKILSGNPSIEEKIDARIRGDFYST
CILFKDIDEADKAFDELDGQETKDTSGRLQKSVLLKRDNGDVANFFVRKMVYGSRPNNTD
VSKKRPEPTDNVEQKREDVDGDKQKRQRTSKKHRKKAKTPVVE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcggctcgccggcgccgagaaggaggtgcttgttgagatcgtgaggttcacg
cagaagaacgggctgaagggcgccgaggggggatggaaggatttcctggctctcaacgac
aagaagtacggcgtctccgtcagcgaccccaagaagcggaccaaggacgtgctgctctct
ttccttgtgaccttctccaaggatttccagaagtacttcagcaaactggtaaggcgccac
acggaacggagagcgatcgagcagtacatgaatgagttctctggcaagatttctcccgag
cagaagcttgttcaactgacgactgaacacaccgagtacaggaaaaattactacttccca
tcttaccaggaggggtggaaaatagtgcggataggaaaactcgccagtagtatgaactct
ggagccatgttggcaattgattgtgagatggtcctttgcaacgatggtacggaagctgtt
gtccgagtatgtgttgttgacagcaaactggaggttaagttggatgaacttgtaaatccc
ttgaaagctgttgcggactataggacaaacatcactggtgtatctaagaaggatttagaa
ggagtcaaattctcattagttgatgttcagaaatcattgaagaaactcttggccaaagga
aagattttggttggccatagcttatatagagatttatatgttctgaagtttgactacagt
cgagtcattgatacggcatacatcttccagtatgcaaatttacctactactgcgtcagct
tctttaaacagtctttgcaagtctgtttgtgggtacactcttcgagaagaaggaaaacca
catgattgcttgaaggatgcagaagctgcgatgaatctagttacagcaaagctcaagcat
ggatttaatgatcccattgagattgcagaaaatagtgtacctgaatctgatcagatgaag
ttgcttgctcatagaattccagtctatcttccttctcaagagctgcttaaaattttatct
ggaaatcccagcattgaggagaagattgatgcaaggattcgaggagacttttattctacg
tgtattttgttcaaggacatagatgaggcagataaagcgtttgatgaactagatggccaa
gagaccaaggacactagtgggcgactgcaaaagtctgtgctcctgaagcgtgacaatggc
gatgtcgcgaacttctttgttcgaaagatggtatacggttcccggcccaacaacactgat
gtttcgaagaagaggccagagcctactgacaacgtggagcaaaagagagaagatgtcgat
ggggacaagcaaaaaaggcaaagaactagcaagaagcacaggaagaaagccaagacacca
gtggttgagtga
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