Lolium perenne (perennial ryegrass): 127337010
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Entry
127337010 CDS
T08650
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03018
RNA degradation
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127337010
09123 Folding, sorting and degradation
03018 RNA degradation
127337010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127337010
03041 Spliceosome [BR:
lper03041
]
127337010
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127337010
mRNA degradation factors
5'-3' decay
Lsm complex
127337010
Spliceosome [BR:
lper03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127337010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
127337010
NCBI-ProteinID:
XP_051219831
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Position
2:complement(303342943..303345871)
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AA seq
100 aa
AA seq
DB search
MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESEREQDDPLKL
TTKTRQLGLIVCRGTAVMLVSPTDGTDEIANPFLAADGAS
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcgcaaggagaccgcacttgacctagccaagttcgtcgacaagggcgtccag
gtcaagctcaccggcggccgccaagttactggaactttgaagggctatgaccagttgctg
aacctagtgctggatgaagcagttgagtctgaaagagagcaagatgacccattgaaattg
acaacgaaaaccagacaacttggtctcatagtgtgtagaggtactgcagtcatgctggtg
tcaccaactgatggaactgatgagattgccaacccttttcttgcagccgatggggcatca
taa
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