Lolium perenne (perennial ryegrass): 127337130
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Entry
127337130 CDS
T08650
Name
(RefSeq) uncharacterized protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127337130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127337130
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127337130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Vps36-NZF-N
AAA_22
Motif
Other DBs
NCBI-GeneID:
127337130
NCBI-ProteinID:
XP_051219976
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All DBs
Position
2:323961191..323965852
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AA seq
683 aa
AA seq
DB search
MFVPKTDNQSDPEDPRGSSGPWQCSICAQENDTGLISCELCGVLRDLSLYFNNADEAEGG
DKRRSKHSGVSVLARSLFTPSSPKSKPVVFSDGFKGNKNATGYTQASLDALHKTYMTHKQ
RRINIVPFKFDIPSPDDMVSTGLKSSRHLRRDFVDITVKKAMADDDDLVTEKDTNTDPSS
VMNLDEAGGSSSSVAADFQDKTLALDNELQNLSLERKIKSKKAKIKKPNHVSQYKPERWM
LQGEDQEMPRQLNLAIVGHVDSGKSTLCGRLLHALGRISKKQMHKNEKEAKEKGKGSFAY
AWAMDESADERARGITMTVGVAYFDTKNYQVNLLDSPGHKDFVPNMISGVTQSDAAVLVV
DASIGSFESGMGINGVGQTKEHAQLIRSFGVEHLIVAVNKMDSVEYSKERFSYVKSQLGI
FLRSCGYKESAISWVPLSAMENENLVARASDTRLTSWIDGSCLLNAIDSLSPPHRDVLKP
LRLPICDVISSHMLGQVAVCGKVVSGAIRSDSKVLVMPAGELATVRIIERDSSRLSLARA
GDNIAIGLQGIDPIHVMSGGVLCHPDYPVSVSSSLELKILVLDITVPILPGLQLELHVHH
AKVSAGLVRIVSLLDQKTGKALAKKPRLLTARQAAIVEVKLERVVCVEEFSALKALGRVF
LRSQGCTIAVGVVTRVHELQEEA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcctaaaacagataaccaatctgatcccgaggatccacgtggaagttctggt
ccttggcaatgctccatttgcgcacaggaaaatgacaccggtcttatatcctgtgagcta
tgcggcgttcttcgggatttgtcgctgtatttcaataacgccgatgaagcggaaggtgga
gataaacgcagaagcaagcattctggagtatctgtactggcaagatcgcttttcacacca
tccagtccaaaatcgaaacctgttgttttctcggatggcttcaaaggcaacaaaaatgca
acaggatatacacaagcttcgttggatgctctgcataagacatacatgacgcataaacag
cgccgcattaacatagtgcctttcaagtttgatataccatctcctgatgacatggtctct
acgggcttaaaatcatccagacatttgagaagagattttgttgatatcaccgtaaagaaa
gctatggctgatgatgatgatcttgtaactgagaaggacacaaatacagacccaagttca
gtaatgaatttagatgaagctggtggaagtagtagcagtgttgctgctgattttcaagat
aaaactcttgctttggacaatgagctacagaatttgagtttggagaggaagataaaaagc
aaaaaagccaagattaagaagccaaatcatgtttcacagtacaaaccagaacgatggatg
ctccagggtgaagatcaagaaatgcccagacaactaaatcttgctatcgttggtcatgtc
gactctgggaaatcaactttatgtggtcgattgctgcatgcccttgggaggatttcaaaa
aagcaaatgcataaaaatgagaaagaagccaaagaaaaggggaaaggatcgtttgcatat
gcttgggctatggatgagagtgctgatgaaagggcacgtggcattacaatgactgtgggc
gtagcatactttgacaccaaaaactaccaagttaatctgcttgactcccctggtcacaaa
gatttcgttcctaatatgatttctggagttacacagtctgatgcagctgtcctagttgtt
gatgcctctatagggtcattcgagtcgggtatgggtattaatggggttggacagacaaaa
gagcatgcacagcttatcagaagctttggtgttgagcacttgatagtcgctgttaataag
atggattcagtggaatattcgaaagaacggttcagttatgtgaagtcacaacttggtatt
tttctccggtcatgtggttataaagaatcggcgatttcttgggttcctttgagtgcgatg
gaaaatgaaaatttggtggcacgagcttcagatactcgtctaacatcatggattgatgga
agttgtcttctgaatgccattgactcgttgtcacctcctcaccgggacgttttaaagccg
ctgcgccttccaatctgtgatgttatttcatcccacatgctggggcaagtggctgtctgt
ggtaaagtcgtgtctggagcaatccgaagcgattccaaggttctagttatgcctgccgga
gagttggctacagtaagaatcatcgagcgggactcctctcgtctcagcttggcaagagcc
ggggacaacattgcgattggtttgcaagggatcgaccctatccatgttatgtccggtgga
gttctttgccatccagattaccccgtgtctgtgtcctcttccctggagctgaagatcttg
gttctggacatcactgtaccaatactgcctggccttcagcttgagctccacgtgcaccat
gcgaaggtgtcagcgggcctggtcaggatagtatcactgctggaccagaagacagggaag
gccttggcgaagaaaccgcggctgctgaccgcgagacaggccgccatcgtcgaggtgaag
ctagagagggtggtctgcgtggaggagttctcggccctgaaggcgcttggccgtgtgttc
ctgcggtcgcaagggtgcaccatcgcggtgggcgtggtgacccgtgtacatgagttgcaa
gaggaagcttag
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