Lolium perenne (perennial ryegrass): 127337136
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Entry
127337136 CDS
T08650
Name
(RefSeq) eukaryotic initiation factor 4A-III homolog A
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03013
Nucleocytoplasmic transport
lper03015
mRNA surveillance pathway
lper03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127337136
09122 Translation
03013 Nucleocytoplasmic transport
127337136
03015 mRNA surveillance pathway
127337136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127337136
03041 Spliceosome [BR:
lper03041
]
127337136
03009 Ribosome biogenesis [BR:
lper03009
]
127337136
03012 Translation factors [BR:
lper03012
]
127337136
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127337136
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127337136
mRNA cycle factors
Stress granule specific factors
127337136
Spliceosome [BR:
lper03041
]
Complex C
Other components
EJC/TREX
127337136
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
90S particles
Helicases
127337136
Translation factors [BR:
lper03012
]
Eukaryotic type
Initiation factors
eIF-4
127337136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA
AAA_22
Cas3-like_C_2
AAA_30
TniB
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
127337136
NCBI-ProteinID:
XP_051219981
LinkDB
All DBs
Position
2:complement(324017538..324021954)
Genome browser
AA seq
406 aa
AA seq
DB search
MATTSRRGPGGGARPMDDENLTFETSAGVEVVGSFDAMGIRDELLRGIYGYGFEKPSAIQ
QRAVLPIITGRDVIAQAQSGTGKTSMISLSVCQIVDTSVREVQALILSPTRELATQTERV
MQAVGQFMSVDVHACVGGKSIGEDIRKLEAGVQVVSGTPGRVCDMIKRRTLRTRAIKILI
LDEADEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHDILEITSKFMTDPVRILVKRDE
LTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRTNNFTVS
AMHGDMPQKERDAIMNEFRGGSTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVRKDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacctcccggcgcggccccggcggcggggcccggccgatggacgacgagaac
ctgaccttcgagacctcggcgggggtcgaggtcgtgggcagcttcgacgccatgggcatc
cgcgacgagctgctccgcggcatctacggctacggcttcgagaagccctcggccatccag
cagcgcgccgtgctccccatcatcacgggccgcgacgtcatcgcgcaggcccagtccggg
accggcaagacctccatgatctccctctccgtctgccagatcgtcgacacctccgtccgc
gaggtgcaagcattgatactgtcgccgactagagagcttgcaacgcagaccgagagagtc
atgcaggctgttggccagttcatgagcgtggatgtccatgcttgtgttggtggcaaaagt
atcggcgaggatattaggaagcttgaggctggggtgcaggttgtgtccggaacaccgggc
agagtctgtgatatgatcaagaggaggaccttgcgcacaagggccatcaagatcctgatt
ctggatgaagccgatgagatgttgagcagaggttttaaggaccagatatatgatgtctac
agatatctccccccagaacttcaggttgttttgatctctgcaactctgccccatgacata
ttggagattactagcaagttcatgactgatccagtcaggatccttgtgaagcgtgatgag
ttgaccctagagggaatcaaacaattttttgttgctgtggagaaggaggaatggaagttt
gataccctatgcgatctttatgatacactgaccatcacccaggctgtcattttctgcaat
actaagcgaaaggtggattggcttactgaaagaatgcgcaccaacaatttcacggtatca
gccatgcatggtgacatgcctcagaaggaaagggatgccattatgaatgagttcaggggt
ggttcaacccgtgttctaatcacaacagatgtttgggctcgaggactggatgttcagcag
gtctctcttgtcattaattatgatctcccgaataatcgtgagctctacattcatcgtatt
ggtcgctctgggcgttttgggcgcaagggtgtggcgatcaactttgtgcgcaaggatgac
atccgtatcctgagagacatcgagcagtactacagcacacagatcgacgagatgccgatg
aacgtcgctgatctgatctga
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