Lolium perenne (perennial ryegrass): 127337138
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Entry
127337138 CDS
T08650
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lper04812
]
127337138
Cytoskeleton proteins [BR:
lper04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
127337138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Katanin_con80
WD40_Gbeta
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_WDR41
eIF2A
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
Beta-prop_ACSF4
PAN2_N
WDR54
Motif
Other DBs
NCBI-GeneID:
127337138
NCBI-ProteinID:
XP_051219983
LinkDB
All DBs
Position
2:324071403..324079568
Genome browser
AA seq
911 aa
AA seq
DB search
MTTNTKRAYKLQEFVAHSSNVNCLKIGRKTSRVLVTGGEDHKVNLWAIGKPNSIASLPGH
TSAVESVAFDSTEVFVAAGAASGTVKLWDLEEAKIVRTLTGHRSNCMSVDFHPFGEFFAS
GSLDTNLKIWDIRRKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDSAVKIWDLTAGKLL
HEFKSHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSTGPEMTGVRSMTFNPD
GRSLLCGLHESLKVFSWEPIRCHDTVDVGWSRLSDLNVHEGKLLGCSSNQSCVGIWVVDL
TRLEPHATGTSSGTMPLQNDSGSRANIGRSSALQNSENNLKASAGRLSVSQNSDSAPKEI
KPAASSGLVPGTPQKVGTGSSTKIAGHSTFASGGTTLKRSSVKSTSASNLHNFSKTDVVI
PAVIMPRTSSGAELDTGSRSYAADVAPVLSKASRRAEPPSDPRTESADVVPAVAPRTSSR
MEMASDSAPDVVSRTGRRMESAADSRKESADVAPVVPRATSRMEMASDSVPVLSKAGRRF
ESATDSRKESTDAAPVGPRATSRMEMASDSRREPSAGRVSPFRIQSRYAEPRKVTNAKVD
IDKVDVGSKDTETNDLTCQIFLPRRNGGVQTINSEDTREDAKHGTAYRSGFSGSAESNAG
QRSDSYVSRMRKPRDNCYVEVSRAGRTRSIVSNWEGRDQSPSHEEPTTSNSAMGPPRGRS
YSSRGSSQAAETNTVTSEEDVLSVLLEEHDLFISSTRSRLTKLQILHQMWQRNDIRGVFA
AMEKMSDHAVSADMASVMMEKSEAITLDLCTTVLPVLSDLLESKTDRHVAVSLELVVKLV
RTFGAVIHSTVSASPSCVGVDLQMEQRRERCNVCFIELEKVKNKLPFLTRRKGQAANTAQ
ELILVFQEIML
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaacaccaagcgcgcctacaagctccaggagtttgtggcgcactcgtccaat
gtcaactgcctcaagattggcaggaagacctcccgggttctcgtcacggggggagaggac
cataaggttaatctttgggctatcgggaagcccaattcgattgcgagtttaccggggcat
acaagtgctgtggagtcggttgcttttgattccacagaagtatttgtggctgcaggagca
gccagtggaacagttaaattatgggatttagaggaggcgaagatcgtccgcacgcttact
ggacacaggtcaaactgtatgtccgttgatttccatccgttcggggaattctttgcctct
gggtcattggacactaatctaaagatatgggatataagaaggaagggttgtatccacacc
tacaagggtcacaccagaggggtgaatgctattagatttacacccgatggccgttgggtt
gtgtctggtggcgaagatagtgcagtgaagatctgggatttgacagctggaaagttacta
cacgagttcaagtcccacgagggtcaaattcagtgcatagatttccatccccatgagttc
cttctggcaacaggttcagctgacaaaactgtcaagttctgggatttggagacctttgag
ctgattggatcaactggacctgagatgacaggtgtacggtctatgacgttcaatcctgat
ggaagatctctgttatgtgggttgcatgagagcttaaaggttttctcttgggaaccaata
agatgccatgatactgttgatgtgggatggtctagattgtctgatctgaatgtccatgag
ggaaaacttcttggttgttcttctaatcaaagttgtgttggaatatgggttgttgatcta
acgcgccttgagccacacgcaacaggtacttcaagtggcactatgccattacaaaatgat
agtggttcaagggctaacatagggcgatcatcagctctacaaaattcagagaataactta
aaagcttctgcaggaagactctcagtttctcaaaattcagattctgcacccaaagagata
aagccagcagcctcaagtggcttggttccaggcactcctcaaaaggttggaactggctct
agtactaaaattgctggacattcaacttttgcatctggtggcaccactttgaagagaagt
tcagtgaagagtaccagtgcttccaatcttcataatttcagtaaaactgacgtggtaata
cctgctgtgatcatgccaagaactagctcaggagcagagcttgatactggttcaagaagt
tatgctgctgatgttgcccctgttctttcgaaggcaagcagaagggctgagcctcctagt
gatcctaggacagaaagtgctgatgtggtgcctgctgttgctcctagaacaagttcaaga
atggaaatggcctctgattcagcacctgatgttgtctctaggacaggcagaaggatggaa
tccgctgctgattctaggaaagaaagtgctgatgtagcacctgtcgttcccagagcaact
tcaagaatggaaatggcctctgattctgtacctgttctttccaaggcaggaagaaggttc
gagtctgctactgattcaagaaaagaaagcactgatgcggcaccggttggtcccagagca
acttcaagaatggaaatggcctctgattctaggagagaaccttctgccggaagagtgtct
ccatttaggatccaatcaagatatgctgaaccaaggaaggtgaccaatgcgaaagttgat
atagacaaagttgatgtgggaagcaaagatactgaaactaatgaccttacttgccaaata
tttcttcctcggaggaatggtggtgtccaaacaataaattctgaagacactcgtgaagat
gcaaaacatggtacagcttacaggtcgggattttcaggttcagcagaatcaaatgcgggc
caacggagtgatagttatgtttctagaatgcgcaagccaagagataattgctacgttgaa
gtttcacgagcaggacgaacaagatcaattgtttctaattgggaaggcagggatcagtcc
ccaagccacgaagaaccaacaacaagcaattctgcaatggggcctcctagagggcgatcc
tattcatctagaggaagcagtcaagcggctgaaactaataccgtaacaagtgaggaggat
gttttatctgttctacttgaagagcatgatctatttatcagctcaacacgatctcggctg
acaaaactgcagattcttcatcaaatgtggcaaagaaatgacatcaggggtgttttcgca
gcaatggagaagatgtctgatcatgctgtatctgctgatatggcaagtgttatgatggag
aaaagcgaagctatcacactagatctatgtactactgtcctgcctgtcctttctgacctt
ctggaaagtaaaactgacaggcatgtagctgtatcactggaactggtggtgaagcttgtc
aggacttttggggccgtgatacattcaacagtatcggctagtccgtcttgtgttggtgta
gatcttcaaatggagcaaaggcgggagaggtgcaacgtatgcttcattgaactggagaaa
gtaaaaaacaagctaccttttcttacaagaagaaaagggcaagctgcaaacacagcccag
gagctcattctcgtcttccaggaaattatgttgtag
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