Lolium perenne (perennial ryegrass): 127337192
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Entry
127337192 CDS
T08650
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127337192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lper04131
]
127337192
Membrane trafficking [BR:
lper04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
127337192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING_2
EIF3I
WD40
WDR55
WDR90_beta-prop_4th
Beta-prop_HPS5
PROPPIN
Motif
Other DBs
NCBI-GeneID:
127337192
NCBI-ProteinID:
XP_051220094
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Position
2:326948018..326954731
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AA seq
946 aa
AA seq
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MSSTARRGHPALVNGDGGYDREEEDEEGYGEEAEAEPEEEPRLKYQRLGGSVPAILSTDA
AAAIAVTDRAVLLGTHDGTLHILDFQGNEVPSKQIAAHTATINDISFEDGEYIGSCSDDG
TVVISNLFTDDKLKFEYHRPMKAIALDPDYSRNYKRFATGGLAGQVLVLTKKTWGGGYNK
KVLREGEGPIHSMKWRADLLAWANDAGVKVHDMKTDRGIAFIERPKGIPRPEVLLPHLVW
QDDTVLVIGWGTSVKIAAIRTESQGLNGMQRSISAVSSDKYVDIVGSFQTGYHISGIAPF
GDLLVMLAYIPEEDDKDKKISTSAPLRQGTAQRPEIHLVSWKNDVVTTDALPIHGYEHYK
AKDYTLAHAPFSGSSNAGGQWAAGDEPLYYIVSPKDIVVAKPRDTEDHIAWLLQHGWHEK
ALAAVEEGQGRTELLNEVGSRYLDHLIIERKYAEAAQLCPKILRGSPSAWERWVFHFAHL
RQLSVLIPYIPIDNPQLSDTAYEVALVALTTNATFHELLLTTIKSWPPALYSASPVISAI
EPQLSSSSMTDPLKEALAELYVINSQYEKALSLYAELLKPEVFEFIEKHNLHDAIHDKVV
NLMILDSKRAIHLLIQHRDIIPPFEVVEQLLHTSKNCDKKYLLHQYLHALFETDIHAGKD
YHDMQLELYADYEPRMLIPFLRTSQHYRLDKAYEIFSRRELVREQVFVLGRMGNAKEALS
TIINKLEDIQEAVEFVTEQHDDELWEELIKQCLQKPEMVGMLLEHTVGNLDPLYIVNLVP
DGLEIPKLRDRLVKIVTDYRTETSLRNGCNDILKTDCVNLLVKYYQEARRGVCMATMDEE
AQGTTRADEGSSRIGERSSTSLRSLEIKSRTRCGARCCLCFDPLSIQDISIIVFYCCHAY
HQSCLEGGLDSMKSTARDSDEDSEDDDGSPSAESKMRCVLCTTAAA
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaccgcgcggcgcgggcacccggcgctggtgaacggggacgggggatacgac
cgggaggaggaggatgaggaggggtacggggaggaggcggaggcggagccggaggaggag
ccgcggctcaagtaccagcgcctcggcggcagcgtgccggcgatcctctccaccgacgcc
gccgccgccatcgccgtcaccgaccgcgccgtgctgctcggcacccacgacggcaccctc
cacatcctcgacttccagggcaacgaggtaccgtcgaagcaaattgccgctcacacagca
accataaatgacatcagttttgaagacggtgaatacataggaagctgctcagacgatggc
acagtagtaataagcaacctcttcaccgatgataagctcaagtttgagtaccatcggccc
atgaaagcaattgcgttagaccctgactactcccgaaactacaaaagatttgctacaggc
ggtttagccggtcaagtgcttgtgctgacaaagaagacttggggaggaggctataacaaa
aaggttctgcgtgagggcgaaggaccgatccattctatgaagtggagggcagatcttctt
gcctgggctaatgatgcaggggtgaaagtgcatgatatgaaaacggacagaggaattgca
ttcatagaaagaccaaaaggaattcctcgaccagaagttttgcttcctcacttggtctgg
caggacgatacagttttagttattgggtggggaacaagtgtcaagattgctgccattcga
acagaatctcaaggactcaatggaatgcaaaggagtatttctgcagtaagttctgataag
tatgttgatatagtgggctctttccaaacaggctaccacatatctgggattgctcccttt
ggggatcttttggttatgcttgcatatatccctgaagaggatgacaaagataaaaaaatt
agcacttctgctcctttacggcagggaacagcgcagcgtccagaaatacatcttgtatca
tggaaaaatgatgtggttactactgatgctctgcccattcatggttatgagcactataag
gcaaaggattacactcttgctcatgcgcctttctcaggaagtagcaatgcaggtggacag
tgggctgctggcgatgaacctctttattacatcgtctctcctaaggatattgtggtagca
aagccaagagatactgaagaccatattgcgtggcttcttcaacatggctggcatgaaaag
gcattggctgcagttgaggaaggacaagggaggactgagcttcttaatgaggtgggttca
agataccttgatcacctgataattgaaagaaaatacgctgaagcagcacaactctgtcca
aagatactgcgaggatctccttcagcatgggagaggtgggtctttcactttgcacatctc
cgccagctttctgtgttgatcccttacattcccattgacaatccacaactgagtgatacc
gcttatgaggttgcccttgtagctctaactaccaacgctactttccatgagcttctcttg
actacgataaaaagctggccacctgcattatactctgcttcaccagtcatatctgccatt
gagccacagctcagttcctcatcgatgactgacccattaaaagaggctttagctgaactg
tatgtgatcaatagtcaatatgaaaaggccctttctctctatgctgaactcctgaagcct
gaagtatttgagtttatcgagaagcataacctacatgatgcaattcatgataaggttgtt
aatcttatgatactggatagtaaaagagcaattcacctgttgatccaacatcgtgatatc
attccaccatttgaagtcgtggagcaattgttgcatactagtaaaaattgcgacaagaaa
tatttgttgcatcagtatttacatgctctgtttgagacagacattcatgctggaaaagat
tatcatgatatgcagctggagttgtatgcagattatgagccaaggatgttaatacccttc
cttcgtaccagccagcattacaggcttgacaaggcatatgaaatattttcacgaagggaa
cttgtcagagagcaagtttttgttcttggtcgtatgggaaatgctaaggaagctctttct
acgattataaacaaactggaagacatacaggaggctgttgaattcgttacggagcaacat
gatgatgaactatgggaggaactgataaaacagtgcctccaaaagcctgaaatggtcggg
atgctgttggaacatactgtcggcaatctcgatcctctgtacattgtcaatttggttcca
gatgggctagaaatacctaaattgcgggatcgccttgtaaaaattgtgacagactatcga
acagaaacttcactgaggaatggatgcaacgatatattaaagacggattgtgttaatctt
ctggttaaatactaccaagaggctcggcgcggagtctgcatggcaaccatggacgaggag
gcacaaggaacaaccagagccgacgaaggttcttcacggataggcgagagatcgtcgacg
agtttacgtagcttagagatcaaatccagaacgaggtgcggtgctcgatgttgcctgtgc
ttcgatcctctatctatccaggacatctctatcatcgtgttctactgctgccacgcgtac
caccagtcttgcctcgaaggtgggttagattcgatgaagtcaacagctcgggatagcgat
gaagactcggaggacgatgatggctccccctcggccgagtctaagatgcgctgtgtattg
tgtaccacagctgccgcataa
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