Lolium perenne (perennial ryegrass): 127339468
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Entry
127339468 CDS
T08650
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03022
Basal transcription factors
lper03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127339468
09124 Replication and repair
03420 Nucleotide excision repair
127339468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lper03021
]
127339468
03400 DNA repair and recombination proteins [BR:
lper03400
]
127339468
Transcription machinery [BR:
lper03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127339468
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127339468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
RsbRD_N
Motif
Other DBs
NCBI-GeneID:
127339468
NCBI-ProteinID:
XP_071683336
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All DBs
Position
3:complement(76895151..76903893)
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AA seq
458 aa
AA seq
DB search
MERRIRLLREDRECELRKLHKKFVVSSILQESEFWAIRKNLLDDEANKALKQKPGVKNVM
VADVRPSANGQLQIFSEKPAVHQAFLDYVPKKLSEQDFWTKYCRAEYLLRAKCTLRAKAE
AAGDEELAMFLKNDDILSKEAKLKIKRVDPVFDMEVDAGDDYIHLPDHGILCDGTKETTD
TDIELARRTLSQDLNRHAAVVLEGRSTDIKSADTKTVAEALARSRKERPFSSVADDASHE
RSVKMARMTEIEDLQVPRSIPYATLCIKDPREFFDSQQANALRSLGENNGVRKAHSCSLS
TDDAFRHLMDQISSAKLNCLIVQSDLAPKVLNELNEGISRSRRLSLKNLQDSLLGRLPRR
TRDELMDHWMAIQELLHHFWSSYPITTAALRNKVQRVLGAMTQIYQTLQDIKESALPDVR
HEISRLVKPMTQALDAAFDHDLDQQQKSSKPGNSPSGF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcgaataagattgcttcgagaagacagagaatgtgaactgcggaagttacat
aagaagtttgttgtttccagtattctgcaagagtctgaattttgggcgattagaaagaat
ttacttgacgatgaagcaaataaagcattgaaacaaaagccaggtgtcaaaaatgtgatg
gtagctgatgttaggccatcagccaatggacagttgcagattttttcggaaaagccagcc
gtgcatcaggcatttttggattatgtcccaaagaagttgtcagaacaggatttttggaca
aaatattgtagagctgagtatctacttagggcaaaatgtacattaagggcaaaagctgag
gctgccggagatgaggaattagctatgttcttaaaaaatgatgatatactttccaaggag
gcaaagctcaagataaaacgagttgatccagtatttgacatggaagtagatgcaggagat
gactacatccatctcccggatcatgggattctctgtgatggcaccaaagagacaactgat
actgatattgaattggctaggagaacactttctcaggatctgaatcggcatgctgctgtc
gttcttgaggggagatcaacagatatcaaatcagctgatacgaagactgttgctgaagca
cttgcaaggtctaggaaggaaagaccttttagttctgttgctgatgatgctagtcatgag
agatcggttaagatggcccgcatgactgagatagaggacctgcaagttccaagaagtata
ccatatgcaacactttgtataaaggatcctcgagaatttttcgattctcagcaagcaaat
gccctgagatctttaggtgagaacaatggtgtaagaaaggctcacagctgcagcctgagc
accgatgatgcattccgtcatttgatggatcaaatatcttctgcgaaattgaactgtctg
attgttcaatcagatttggctcctaaggttcttaatgaattgaatgaaggaatttcacga
tcacgaaggcttagtcttaagaatctccaagacagtctccttggtcgtcttccacgccga
acacgagatgaacttatggaccattggatggctatccaggagttgctgcaccatttttgg
tcatcgtacccaataacaactgcagcccttagaaataaggttcaaagggttctaggtgca
atgacacagatatatcaaacgttgcaggatataaaggaatcagcactgcctgatgtaaga
cacgagatatctcgacttgtaaagcccatgacccaggctctggatgctgccttcgaccat
gatctagaccagcagcagaaatcttcaaagcctgggaacagccccagcgggttttga
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