Lolium perenne (perennial ryegrass): 127340671
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Entry
127340671 CDS
T08650
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127340671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lper03019
]
127340671
04121 Ubiquitin system [BR:
lper04121
]
127340671
03036 Chromosome and associated proteins [BR:
lper03036
]
127340671
03400 DNA repair and recombination proteins [BR:
lper03400
]
127340671
Messenger RNA biogenesis [BR:
lper03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
127340671
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127340671
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
127340671
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
127340671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
zf-HC5HC2H_2
BRCT_2
PHD_NSD
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
127340671
NCBI-ProteinID:
XP_051222365
LinkDB
All DBs
Position
3:complement(42068312..42114980)
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AA seq
548 aa
AA seq
DB search
MSCGGGRPPPGFGPAAAGWRPLGADFRDTKSATRTSTMVNIKTETDDGNLEVLQQRQMQN
EAMASQSSCQTKPSLAGNNASPGVNASNTKIRNSLGKDGKFEVNEGTTGLRPPTPINLFE
DECVFCHSFRTSEEFHGPMVQYQNGRIVSTNEGNPTNTIYVHKKCMYWAPRVYLNGDIIV
NMEKEISRASRLKCSRCNLPGAALGCYNEPCGQTYHVPCARMMVPKCRWDVKYLNVLCPK
HKSDPLPGDESSPIMESNISSPILRNQYLDKQVMHVIYRREDQQVDQLNTSSSSLPQGQY
SDIEGISADYQREEKQTKHSRTPVNQWVLLGSVLSASEKDSLKEFASLTNSTLVEEWDKN
VTHVIVGRGADSKSLNESYEVLMATLSGKWVVTAGWIVDCLVEPIPRPKTCLAEPIPGPE
ISYEVTSIDGPKKGRAEATEMAPKLFSGLHFLLSAYMKPEDTGNIKDLIVAAEGQVLDEM
SPCSLQENLDRNPAKVYFVYASTYCLDLGKEMEEAVKYQDSGAQVISEWSLYGAIAAYDV
RILERIST
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcggcggagggaggccacccccggggttcggtccggccgcggccggctggcgg
ccacttggcgcagatttccgagataccaagtcagctactcgtaccagcacaatggtcaac
ataaaaacagaaactgacgatggcaatcttgaggtcctgcaacaaagacagatgcagaac
gaggcaatggctagtcaaagcagctgtcagaccaaaccaagtcttgctgggaacaatgcg
tcaccaggtgttaatgcaagtaacactaaaatacgcaatagtttggggaaagatggcaag
tttgaagtcaatgaaggtactactggattgagaccgccaacaccaatcaacttatttgaa
gatgaatgtgttttctgccattcatttagaactagtgaggagtttcatggtccgatggta
caatatcagaatggaaggattgtgtctaccaatgagggcaacccaaccaataccatttat
gtccataaaaagtgcatgtactgggccccaagagtatatctcaatggtgatattattgtt
aacatggagaaggaaatcagtcgtgcttcaagattgaaatgcagcagatgcaacctccca
ggagcagctcttggttgttataatgaaccgtgcggtcaaacttatcatgttccatgtgca
aggatgatggtaccaaaatgccgttgggatgttaaatatctcaatgttctgtgccccaag
cataaatccgatccattaccaggtgatgagagctcaccaataatggaaagtaacatttct
tcgcccatccttcggaatcaatatttagataaacaagtaatgcatgtcatttatagaagg
gaagatcaacaagtagatcagctgaacacttcgagttcttccttgcctcagggtcaatat
tcggacatagaaggaatttctgccgattaccagagagaagaaaaacaaacgaagcactct
agaacccctgtgaatcaatgggtcctactcggttcagttttaagtgcatcggagaaggat
tccctcaaggaatttgcttccttgaccaattcaaccttggttgaggaatgggacaaaaat
gtgactcatgttattgtgggtagaggtgctgatagtaaatctctaaatgaatcatatgag
gtcctgatggcaacactctctgggaaatgggttgttacagctggatggattgtggattgc
ttagtggagccgattccacgtccaaaaacttgcttggcagagccaattccaggtccagaa
atttcttacgaggtgacatcgattgatggaccaaagaaaggaagagctgaagcaactgaa
atggcaccaaagctgttctcaggacttcatttcttactcagcgcctacatgaagccagaa
gacaccggaaacataaaagatctcatagtagccgccgaagggcaggtactagatgaaatg
agcccatgttcattacaggagaatttggaccgaaatccagccaaggtatacttcgtctat
gcttccacttattgccttgatcttggcaaggagatggaggaggccgtcaagtaccaggac
tcaggagcgcaggtgatcagcgagtggagtctgtatggcgctatcgcggcttatgatgtg
cggatcctggaacggatatctacttga
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