Lolium perenne (perennial ryegrass): 127340988
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Entry
127340988 CDS
T08650
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127340988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127340988
Enzymes [BR:
lper01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127340988
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127340988
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_3
F54D1_6_C
DUF6011
Motif
Other DBs
NCBI-GeneID:
127340988
NCBI-ProteinID:
XP_051222717
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All DBs
Position
3:25735144..25737158
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AA seq
284 aa
AA seq
DB search
MGAGLKIERESGPHAKKRREGEICGGDRDEDKQMVSVGSNCGIIALEALDCTVCNHPLRP
PILQCATGHVICMSCHRKLRNKDRCYVCSITGGYQRCIVLEKILESVQIPCSNTMYGCTV
KTHYLEGADHDKSCPCAPCFCPDPSCHFTGSTAELLDHLTHTDNWPATEFECGQRFDLQI
QEGMHVLYTREDGTLLLVKFTPVPPFGNAVSIMCVDPHAVAGDRKFRCLVGSNCSTDSWR
SDFRTISTNLSNDLPTEDGSYSLVVPTLSCYSGINVTISKVTVL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgggggctggattgaagatcgagagggagagcgggccgcacgccaagaagaggagagaa
ggggagatctgcggcggcgaccgcgacgaggacaagcagatggtttccgttggcagcaac
tgcggcatcatcgctttggaggcgctggactgcaccgtctgcaaccaccccctccggcca
ccaatcttgcagtgcgccactgggcatgtgatttgtatgtcctgccatcgcaagctccgg
aacaaggacaggtgctacgtgtgctccattactggcggctatcaacgctgcatcgtgctc
gagaaaatcctggagtctgtccagatcccttgctccaataccatgtacggttgcaccgtc
aagacacattacctcgagggagcagatcatgacaagtcgtgcccatgtgcaccgtgcttc
tgccctgatcctagttgtcactttactggctcaaccgcagagctccttgaccatctcacc
catacggacaactggccggcaactgagttcgagtgcggacagcgttttgacctgcagatc
caggaaggaatgcacgttctctacacaagggaggatggcaccctgttgctggtaaaattc
acgccggtgccgcctttcggcaatgccgtctccatcatgtgtgttgatcctcatgccgtg
gcgggggaccgcaagttcaggtgcctggttggttccaactgcagcaccgatagttggcgt
tcagatttccgtaccataagcaccaatctgtccaacgacttgccgacggaggatggcagc
tactcattggttgtgccgactctttcttgttacagcggcatcaatgtcactatctcaaag
gttacggtgctgtag
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