Lolium perenne (perennial ryegrass): 127341177
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Entry
127341177 CDS
T08650
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Module
lper_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127341177
Enzymes [BR:
lper01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
127341177
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Cytomega_UL20A
Motif
Other DBs
NCBI-GeneID:
127341177
NCBI-ProteinID:
XP_051222911
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Position
3:56617829..56622128
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AA seq
397 aa
AA seq
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MSIPAERTFFLVLLLLVLAAVQSAAQQGKRYSVMDFHAAGDGSTDDAKAFAATWNATCGD
SCSPTMVIPGGKTFLLSQIMLDGPCKSPVSVELDGKIVAPNSIWTTAAANLLTFYSVNNL
TVNGSGQMDGNGDIWWTCFNQKKCHVRPILLAFASCNNLSVKNIHLKDSPDKHMTLFRCS
QVQVNNVSVRAPGDSPNTDGINMALSDHVYISNCSIQTGDDCVSILSGTSDVIVTNSTCG
PGHGISVGSLGGDGTTSLVERITVSNCSFSKTLTGVRIKSWQGGNGKANGFVFENLNMTD
VQFPIDIDQFYCPRGNCPPQNSAVAISDAKFINIQGTSSNPEAIQIMCSQSVQCRGIYLD
NVNLTSSSRTAQTRATISNAYGTVGGMVKPHVQFLGA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcccggcggagcgtaccttcttcttggtgctgctgctgctcgtgttggcagcc
gttcaatcagcagcgcagcaaggaaaaagatacagcgtcatggatttccatgctgctggg
gatggcagcacagatgatgcaaaggcgttcgcggcgacatggaacgcaacttgcggcgac
agctgcagtccgaccatggtcatccctggaggaaagacgttcttgctaagccagatcatg
ttggatggaccctgcaagtctcctgtcagcgtggagctggacgggaagatcgtggcgcca
aactccatctggacgacggcagcagcgaacctccttaccttctacagcgtaaacaacctc
acggtgaacgggagcggccagatggacggtaacggcgacatctggtggacttgcttcaac
caaaagaaatgccatgtccggccaattttgctggcattcgcaagctgcaacaacctatcc
gtgaagaacatacacctgaaggacagccccgacaagcacatgaccttgttccggtgcagc
caggtgcaggtgaacaacgtgtccgtcagggcgcccggcgacagccctaacacggacggg
atcaacatggccttatccgaccacgtttatatctcgaattgctctatccaaaccggagat
gattgcgtgtcgatcctatctggcaccagtgatgttattgtcactaacagcacgtgtggg
cctggtcatggcatcagcgtgggaagccttggaggtgatggtacgacatcacttgtggaa
aggattacagtatccaactgcagcttctccaaaacgttgactggtgtgaggatcaaatcg
tggcagggaggcaatggcaaagcaaatgggtttgttttcgagaacctcaacatgactgat
gtccaatttcctattgacattgaccagttttattgtccccggggaaattgtccgccacag
aatagcgctgtggccatatccgacgccaagttcatcaacatccaggggacatcctccaac
cccgaagccatccagattatgtgcagccagagcgtgcagtgccgcggcatctatctcgac
aacgttaacctgacctcctctagtcgtaccgcccaaacacgagccactatttcaaatgcc
tacggaaccgttgggggcatggtgaaaccacatgtacagttcctgggcgcttga
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