Lolium perenne (perennial ryegrass): 127341179
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Entry
127341179 CDS
T08650
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper00040
Pentose and glucuronate interconversions
lper01100
Metabolic pathways
Module
lper_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127341179
Enzymes [BR:
lper01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
127341179
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
DUF3551
End_N_terminal
Beta_helix
Motif
Other DBs
NCBI-GeneID:
127341179
NCBI-ProteinID:
XP_051222916
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All DBs
Position
3:56486517..56488695
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AA seq
364 aa
AA seq
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MDFHAAGDGSTDDAKAIAATWNATCGDSSSPTMVIPGGKTFLLSQIRLNGPCKSPVTVQL
DGNIVAPNAIWTTKAANLLTFYRVNNLTVNGSGQMDGNGAIWWSCFNNKKCRVRPILLAF
ASCNNLSVKNIHLKDSPDKHMTLFRCSQVQVNNVSVRAPGKSPNTDGITMAFSDHVYISN
CSFKTGDDCVSILSGTSDVNITNSACGPGHGISVGSLGGNNTTALVERITVSNCSFSKTM
TGVRIKSWQGGSGKANGFLFENLNMTDVQYPIDIDQFYCPPGNCQPQDSAVAISDARFIN
IHGTSSNPKAIRILCSQSVQCRGIYLDNINLSCSRHTARTRATISNAYGTIAGTVKPHVQ
FLGA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggatttccatgctgccggggatggcagtacagatgatgcaaaggcgatcgcggcgaca
tggaacgcaacttgcggtgacagcagctcgccgaccatggtcatccctggaggaaagacg
tttttgttaagccagatcaggttgaatggaccctgcaagtcgcctgtcaccgtgcagctg
gacgggaacatcgtggcgccaaacgccatctggacgacgaaagcagcgaacctccttacc
ttctaccgcgtcaacaacctgacggtgaatgggagtggccagatggatggcaatggcgcc
atctggtggagttgcttcaacaataagaaatgccgtgtccggccaattctgctagcattc
gcaagctgcaacaacctatccgtgaagaacatacacctgaaggacagcccagacaagcac
atgaccttgttccggtgcagccaggtgcaggtgaacaacgtctccgtcagggcgccaggc
aaaagccctaacacggacgggatcaccatggccttctccgaccacgtttatatctcgaat
tgctctttcaaaaccggtgacgactgcgtgtcgattctatcagggaccagtgatgttaat
atcaccaacagtgcgtgtgggcctggtcatggcatcagtgtgggaagccttggaggcaac
aatacgacagcacttgtggaaaggattacagtatccaactgcagcttttctaaaactatg
actggtgttaggatcaaatcatggcagggtggcagtggcaaagcaaatggtttccttttt
gagaacctcaacatgactgatgtccaatatcctattgacattgaccagttctattgtccc
ccgggaaattgtcagccacaggatagcgctgtggccatatctgacgccaggttcatcaac
atccacgggacatcctccaaccccaaagccatccggattctgtgcagccagagtgtgcag
tgtcgcggcatctatcttgacaacattaacctctcctgctctcggcataccgcccgaaca
cgagccactatttcaaatgcctacggaaccattgcgggcacggtgaaaccacatgtacag
ttcctaggcgcttga
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