Lolium perenne (perennial ryegrass): 127341280
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Entry
127341280 CDS
T08650
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
lper
Lolium perenne (perennial ryegrass)
Pathway
lper03440
Homologous recombination
lper03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127341280
03460 Fanconi anemia pathway
127341280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lper04121
]
127341280
03036 Chromosome and associated proteins [BR:
lper03036
]
127341280
03400 DNA repair and recombination proteins [BR:
lper03400
]
127341280
Ubiquitin system [BR:
lper04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127341280
Chromosome and associated proteins [BR:
lper03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
127341280
DNA repair and recombination proteins [BR:
lper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
127341280
FA (Fanconi anemia) pathway
Downstream FA components
127341280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
127341280
NCBI-ProteinID:
XP_051223043
LinkDB
All DBs
Position
3:complement(51842311..51854148)
Genome browser
AA seq
1574 aa
AA seq
DB search
MPRRWQVWDGPDGRLVWIPAPDSDSDAPPTAAANPPLPLPAPRAKGTAAAAAAASSDDAP
VQGPGAADGTRVESMSDLLVQARSELLEGDGVIGPTGDAGKGELFCTGSGRSVSVSESAI
RRARALVGEEEASVKKRKQPFGDAADVEGEMDDSFRGALHNGSMTPVFQTGSGKAVSLGK
DSIHRARAILEDVDSAAGAVQPMFRTGMGRPVPVSRTSIDKATAVLEGKTIAEQGHFDKS
VDGMEQFPLFQTGSGRVVSVSVASLQKAKSVFKDNNTCGENAESFGRPDQPMMFQTDSRR
PVVISGRSIERSRGAAKEGDMEKSGHWDTDCQFPMFQTGLGKPVAVSRSSVEKARAVLEK
EKNNKTGHGGVSATNFQNETPRSVLMSSSSIMSDRTVTPNGDSVMQEKNHESGNHLPLFQ
TGLGRSIAVSKSSVKRASAVLEPRNIAKELEDEAHLDGDHDTPVLKTGLGRSILASESSG
KKVPVILEAEEAVKGVNNDNGEAFGEDTSFQAGIQMFVPQRRSSSRKASILLEQQNFAEK
GYGDCGSELPMFQTGSGKSVLISESSVQKARAVLEEEGNINKDNHKLLNMDQKFTVFTSP
LKTSCARTVNISSVGVSRAASLLGLEENTLSTQFFGHVGDKLGTKITVERENPDQRLDLA
SRTTENQVHKEPHLPFELSNNTVFDSGEHSIRFSTAGGRSMAISSDALQRAKSLLGESDV
VSTNKPTDYSLAAGCKDEITNSTVAPKGGGSDLSKISRASGKPEIATFSRQGMSDRKHTR
SFGHAVPDTPATNENANSFHVGSFSISEFSKIPKPSSRVLSEADNVDDTKDKTQRLHMPA
GVLVDITNFMGTHSGNIDHVANEKRRIGGRNSPSPFKRPRSSRFIAPIITNKKSSAGIPK
LPSSQTTSCRTKLSASYPFQHKRKTWKEYFGGPPCFSFLTEHPTDEVKLMDAKGAEKYKF
HDTDTGAEEFQRMLLACGASLTYATKEWVNNHHKWIVWKLASLERCYPTKAAGKFLTVAN
VFDELKYRYDREVNNGHRSAIKKILEGNALPSLMMVLCISAVYSHPDVSKSKGEAGRRDE
NENSIDNKSLLAAKINAPAQIELTDGWYALEASLDAALSEQLQKRKLFLGQKLRIWGASL
CGWTGPVSFHEISGTVKLMLHVNGSYRARWDDPLGFCKHVGPPLAFKCIKASGGRVPRTL
VGVARIYPVLYKERLSDGRSVVRSERMERKALQLYHQRVSKIAEDIMSEQDENCGNSDGS
EEGAKICKLLERAAEPEVMMAGMTSEQRISFSSYQAKQKEARQNEVAKKVENALEVAGLS
SRDVTPFVKVRVTSIIQKISASETINKEGLITIWNPTEKQKADLVEGQIYFVTGLVPSAY
CTGSLYLHARGSSTTWKPLASAQAADFEPFFTPRKAVELSLFGEIPLASEFDIAGVVLHV
GDVYLCSSQKRQWLFLTDGSKFTSAQHSAEQDDCLLAVSFSCRIAGDDSVFFSHALAGNT
VGFSNMVKRQKDQMNRIWVAEATESSTYTVSHEISKKSHLKEAAICAEKWASSSHAKIQQ
LKERVLCIIGDSGG
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaggtggcaggtctgggacgggcccgacggccgcctcgtctggatccccgcc
cccgactccgactccgacgctccgccgaccgccgcggcgaacccgcctctccctctgccg
gcgccgcgcgccaaggggacagccgccgccgccgccgccgcttcgtcagacgacgccccg
gtccaaggccctggcgccgccgacggaacccgcgtcgagtccatgtccgacctcctcgtc
caagctaggagcgagctgctcgaaggcgacggggtgatcggaccaactggagacgcaggg
aagggtgagctgttctgcactggatcagggaggtcggtgtctgtcagcgagagcgctata
aggagagccagggcgttggtcggggaggaggaggccagtgttaagaagagaaagcaaccc
tttggcgatgcagctgatgtggaaggtgaaatggatgattcatttagaggtgcgctgcat
aacggtagcatgaccccggtgttccaaactggatcagggaaagcggtctcgctgggcaag
gactcaatccacagggcaagagctattttagaagatgttgatagtgccgctggtgccgta
caaccaatgttccgtactggaatgggtaggccggttcctgtgagccggacctccattgat
aaggcaacggctgttttggagggaaaaacaattgcagaacaaggtcattttgataagagt
gtggacggcatggaacagtttccattgttccaaactggttcaggaagagttgtatcagtc
agtgtggcatctcttcagaaagcgaagtctgtttttaaggataataatacctgcggtgaa
aatgcggagagttttggtaggcctgaccagcctatgatgttccaaactgattccagaaga
ccagtcgtgatcagcggaaggtccattgagagatctagaggtgcggcgaaggagggagat
atggaaaagagtggacattgggatactgactgccagttcccaatgttccaaactggatta
ggaaagcctgttgccgtgagccgcagctcagttgagaaggcaagggcagtattggagaaa
gaaaaaaataataaaaccggacatggaggtgtcagtgccacaaattttcaaaatgaaacg
ccaaggtctgttttgatgagtagcagttcgatcatgagtgatagaaccgtaacaccgaac
ggagatagtgtaatgcaagagaaaaaccatgagtctggcaaccacttgccgttgtttcaa
actgggctagggaggtcaattgctgtaagtaagagctcagttaagagggcaagtgcagtt
ctggagccgaggaatattgcaaaggaattggaagatgaagctcatttagatggtgaccat
gatactccagtgctcaaaactggattaggaagatctatcttagcaagtgagagctctgga
aagaaagtacccgttatcttagaggccgaagaagcagttaaaggtgtaaataatgacaat
ggcgaagcctttggtgaagacacatcattccaagctggaatacagatgtttgtaccccaa
cgtagaagttcaagccgtaaggccagtattctgttggagcaacaaaacttcgcggagaaa
ggatatggagactgtggaagtgaactgccaatgtttcaaactggatctggaaagtctgtc
ttgattagtgaaagttcagtgcagaaggcaagggctgttctggaggaagaaggcaatata
aacaaagataatcataagctccttaacatggaccaaaagtttactgtctttacttcacct
ctcaagacaagctgtgcaagaacagtaaatatatcttcagttggcgtgtctcgagctgct
tctttgttgggcttggaagagaataccctttcaacacaattttttggacatgtgggggat
aaactaggcacgaaaataactgttgagcgggaaaatccagaccagaggcttgatcttgca
tctcgtacaacagaaaatcaagtgcacaaggaaccacatctgccgtttgaactttctaat
aacacagtctttgattctggtgagcattcaatcagattcagtaccgcgggaggcagatca
atggctatttctagtgatgcacttcaacgtgctaaaagtcttctgggtgaatcggatgtg
gtttcaacaaataagccaacagattactctttggcagctggttgtaaagatgagataaca
aattcaactgttgcccccaaaggcggcggatctgatttatcaaaaataagtagggccagt
ggaaaacctgaaatagcaacattttcccgccaaggaatgtctgataggaagcacactaga
tcctttggacatgctgtacctgatacccctgcgactaatgaaaatgctaatagttttcat
gtggggagtttttcaatcagtgaattttcgaagattccaaagccttcttcaagggtttta
tctgaagctgacaatgtggacgacactaaagataagacacaacgactccatatgccagct
ggagtgttggtggacattactaatttcatgggtacacattctggaaatattgaccatgtt
gctaatgagaagagaagaattgggggaagaaactctccatctccatttaaacggccccgc
tcatccaggttcatcgcacctataatcaccaacaaaaaatcctctgctggaatacccaag
ctgccatcatctcagaccacgtcctgtcgaacaaagctgtctgcatcttatccttttcaa
cataaaaggaaaacttggaaggagtattttggtggtcctccctgcttcagttttttgacg
gaacatccaacagatgaagtgaagctcatggatgcgaaaggagctgagaagtacaagttt
catgatacagatactggtgcagaagaatttcagaggatgctgcttgcctgcggtgcttca
ttgacatacgcaactaaagaatgggtgaacaatcaccataaatggatcgtgtggaaactt
gcttcacttgagagatgctatccaactaaagctgctggcaaattcttgacagttgctaat
gtttttgatgagctgaaatataggtatgaccgagaagtgaacaatggccaccgatcagca
attaagaaaattttagaaggaaatgctttgccatctttgatgatggtgctctgcatttca
gctgtttactcccatcctgatgtaagtaaatccaagggtgaggctggcaggagagatgaa
aatgagaacagcatcgataataaaagcttgttagctgctaaaataaatgcgcctgcacaa
attgaattaactgatggatggtatgcactagaagcgtcattggatgcggcactttcagaa
caactacagaaaagaaagctttttctaggacaaaagcttcggatatggggggcttctttg
tgtggttggactgggcctgtgtcatttcatgagatatcaggcactgtcaaattgatgctc
catgtaaatggcagttatcgtgcaagatgggatgatcctttgggattttgcaagcatgtt
ggacccccactggcgttcaagtgcataaaagcttctggtggccgagtccctaggacactg
gttggagttgcaaggatatatcctgttctgtataaggagaggttgtctgatggtcgttct
gttgtgagatctgaaaggatggaaaggaaagcgctacaactgtaccaccagagagtatct
aagatcgcagaagacattatgtctgaacaagacgaaaactgtggcaattctgatggtagt
gaggaaggggcaaaaatttgcaaactgctagagagggcagctgagcctgaagttatgatg
gcaggcatgacgtcagagcagaggatatctttctcatcatatcaagcaaagcaaaaggaa
gctaggcaaaacgaagtggctaagaaagttgagaacgctcttgaagttgctggccttagt
tcaagagatgttacgccgtttgtgaaagtgagggtgacaagcattattcaaaaaatctct
gcttcagagaccatcaacaaggaagggctaataacaatttggaaccctactgagaagcaa
aaagccgacctggtggagggacaaatttactttgtcacaggactggtgccttcggcctac
tgtactggcagtctttacttgcatgctagaggatcatctaccacgtggaagccattagca
tcagcacaggctgcggattttgaaccatttttcaccccacgtaaggcggttgagctgtca
ttgtttggtgagataccacttgcaagtgaatttgacattgcaggcgttgttttgcatgtt
ggcgatgtttatttatgtagcagccagaaaagacagtggctctttttgacagatggatct
aaatttacctcggcacagcactccgcagagcaagatgattgtcttctagcagttagcttt
tcttgccgaattgctggcgatgactcagtttttttcagtcacgcccttgctggaaataca
gttggtttcagtaatatggtcaagcgacagaaagaccagatgaatcgcatatgggtagcc
gaggcaacagagagctctacctatactgtttctcatgagatctcaaaaaaatcgcatctt
aaggaagctgccatttgtgccgagaaatgggcttcgagttctcatgctaaaattcagcag
ctaaaggaaagggttttatgcatcattggagatagtggtggctga
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