Lolium perenne (perennial ryegrass): 127341284
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Entry
127341284 CDS
T08650
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lper
Lolium perenne (perennial ryegrass)
Brite
KEGG Orthology (KO) [BR:
lper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lper03009
]
127341284
Enzymes [BR:
lper01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127341284
Ribosome biogenesis [BR:
lper03009
]
Eukaryotic type
Pre-60S particles
Helicases
127341284
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GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
YaaC
Motif
Other DBs
NCBI-GeneID:
127341284
NCBI-ProteinID:
XP_051223053
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Position
3:40331346..40334618
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AA seq
643 aa
AA seq
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MASSSTSPATAAARKKRALTEQRFSELSPAISPEVVEALKRGGFRRCTPVQAATIPLLLS
HKDVAVDAATGSGKTLAFVVPVVEMLRRLPSPPKPHQVLGIIISPTRELSSQIYNVAQPF
FATLKGVSSILLVGGLDIKAELKKVEEEGANILVGTPGKLFDIMERLDSLEYKNLEILIL
DEADRLLDMGFQKQVTSIISKLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVQVKTEAK
DAAQQDLGPSKTPLGLRLEYMICEPSKKSSQLVDFLVHNNGKKIMVYFATCACVDYWSVV
LPMLNLLKGSPVIPYHGKMKQGPREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQY
DPPQDPNVFIHRAGRTARYDQEGDAIVFLLPTEDSYVEFLKLRGVPLMERECSSDIVDIV
PQIRAAASEDRNIMEKGLRAFVSFVRSYKEHHCSYIFNWKGLEVGKLAMEYGLLQIPSMP
EVKHNNLSLKGFMPVSNVNFSQIKFKDKTREKQRQKVLKRKAEELAQEPPEPERRVREKP
LKPKRKQTGKQRQTIQTKEDMDELTHEYRLLKKLKKGVIDEDEYEKLTGFGDSDGGGSSD
GEDKGKERRRKVQKKLKQRGGKTRGGSARKFDGKSSKLKSRRK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctccacctcgccggcgacggcggccgccaggaaaaagcgcgcgctgacg
gagcagcggttctcggagctgtccccggccatttccccggaggtggtggaggccctgaag
cgcggcggcttccggcggtgcacgcccgtgcaggcggcgaccatcccgctgctgctgtcg
cacaaggacgtggccgtcgacgccgccaccggctccggcaagaccctcgccttcgtcgtc
cccgtcgtcgagatgctccgccgcctcccctcgcctcccaagccccaccaggttctgggc
atcatcatctccccgacgagggaactgtcgtcgcagatatacaacgtggcgcagcccttc
ttcgcgacgctcaagggcgtgtcgtccatcctcctggtcggcgggctggacatcaaggcg
gagctcaagaaggtggaggaggagggcgccaacatactggtcggcacacccgggaagctc
ttcgacataatggagcgcctggactccctggagtataagaatctcgagatactgatcctg
gatgaggcggataggctcttggacatgggcttccagaagcaggtcacctcgattatttca
aagttaccgaagctgaggagaaccgggctgttctccgctacacagactgaggctgtcgag
gagctggcaaaagcagggttgaggaatcccgtgagggtccaggttaagacggaggccaag
gatgctgctcagcaagatcttggtccctccaagacgccgctggggctccggttggagtac
atgatatgtgaaccatcaaagaaatcatcacaacttgttgatttccttgtgcacaacaac
ggaaagaaaatcatggtctattttgcaacatgtgcctgtgtagattactggtctgttgtt
cttccaatgctcaacttacttaaaggttctccagtaataccttaccatggaaagatgaaa
cagggccctcgtgagaaagctctggcgtcattttctgctctttcaagtggtattttagtc
tgcactgatgttgcagcaaggggtcttgacataccacatgttgatctaattgtgcagtac
gatccacctcaagatcccaatgttttcatacatagagcaggtcgcactgcccgctatgat
caagaaggagatgctattgtatttctcttgccgacggaggattcttatgttgaattctta
aagcttcgaggtgtacctctcatggaaagggagtgttccagtgatattgtagatattgtg
ccacagatcagagcagctgcatcagaagatcgtaatatcatggaaaaggggcttcgagct
tttgtatcatttgttcgttcatacaaggagcatcactgctcgtacattttcaattggaaa
ggacttgaagtaggaaagctggccatggagtatggcttacttcagatcccatccatgcca
gaagtgaagcacaataatctttcactgaagggatttatgcctgtcagcaacgtcaacttt
tcacaaatcaagttcaaggacaaaactcgagagaagcaacgccagaaggtactgaaaaga
aaagcggaagagctagctcaagagccacctgagccagaaaggagagttcgggagaagcct
cttaaaccaaagcgcaagcagacgggcaagcagcgacagacgatccagaccaaggaggac
atggatgagctgacgcacgagtaccggctcctgaagaagctgaagaagggtgtgatcgat
gaggatgagtacgagaagcttaccgggttcggagactcggacggcggaggttcttctgat
ggggaggacaaagggaaggagaggcgcagaaaggttcagaagaaactcaagcagagagga
gggaagacgagaggagggtctgccaggaaatttgatggaaagagtagtaagctgaagagc
aggagaaaatga
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